Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00677 ATGGCCTTTTCTGATGTTTATTCTCCTCCTACACCTCCACCTCCACCTCTCACGAAATACGATGTTTTTATCAGCTTCAACGGTAAAGACACTCGTAATGGCTTCACCAGCCACCTTCACTCTGCTCTGTGCAGAAACCAGATCGAAACATTCATAGATTATAGAATTGAGAAAGGTGGTGAGATCTGGGAAGAACTCGTGCAAGCCATAAGAGACTCGTCGGTGTATCTGGTCATCTTCTCAGAGCACTATGCGTCTTCAAAGTGGTGCTTGCGGGAGCTTGCTGAGATCATAGAACTCACAAACATGGTGGAAAAGGGACACCACCATATTATTCCTGTGTTCTACAGGATTGAACCCACGCATGTTCGGAAGCAGACGGGAAGCTACTACAGTGTGTTCGCAGAGTATGACAGAAATTTGGATTATCGCCTTGTGCGCCAGTGGAGGAAGGCACTCTTCCATGCAGCCAATATCTCAGGATTCGAATATAACCATCACCATAGCAGGACTGAATCTGACCTCATTGAAGGCATAGTCCAAATGATTGTCCGGAAATTGGATCAGAAATACACAAGTGAACTCAGGAGCCCTTTTATACATGACCAAAATTATGCATCCATTGAATCTGTATTGATCAACTCACAGGAAGTTCGAACCATTGGAATTTGGGGCATGGGCGGCATAGGAAAAACAACTATTGCGGCTGCCATTTTTCAAGAGTTCTCTCCCAAGTATGAAGGTAGTTGTTTCTTGGCCAATGTAAGAGAAGAATCTTCAAGGCATGGCCTCAACTACATTTTCAATAGACTTCTTTCTGAGTTGCTGCAGGAACATGTTCATATTACCACTCCAAAGATTGTGTCTTCTACTATACTCCGTAGATTGAGGCGTAAGAAAGTTTTCATTGTACTAGATGATGTGAATACTTCTGAGCTTCTAGAAAACTTGCTTGGAGTGGGACAAGATTATCTTGGACTTGGTAGCAAAGTTATTGTTACCACCAGAGATAAGCATGTTCTTCTGAGTAGATCAGTTGATCATATCCATCAAGTCACGGAAATGAATGATGAGAACTCTCTCAAACTGTTCAGCTTGAATGCCTTCAACAGAACCCATCCTCCTGAAAATGAATACTGGGAGCTATCAAAAAGGGCACTTGCTTATGCCAGAGGAAATCCTTTAGCTTTGAAAGTTTTGGGGTCATTTCTTCATTCCAAAAGTGAAAAGGAATGGGACAATGCATTGACAAAACTAAAGAGGATTCCTAATGCAGATATTCAGAAGGTGTTGAGGTTGAGCTTCAATGAATTAGATGATACAGAGAAGGATATATTTCTAGATATTGCATGCTTTTTTAAAGGAGAAGAGAAAGAAAAAGTGATAAGAATATTGAATGAGTGTGGCTTCTTTGCAGATATTGGAATAAGAAACCTTTTAGACAAGGCTCTTATATCAATAGCTACCAATAAAAGCATACAAATGCATGACTTGATACAGGAAATGGGTCACAAAATTGTGTGCGAAGAATCTCTCAAGAATCCTGGAAAGCGTAGCAGAGTGTGGCACCCAGATGAAATTTGCAACATATTAAAAAATGATGAAGGGTCCGCTACAATTGAAACCATATATTTGGATATGACTGAGCGGACAGAAATATGTATAAGCTCTGATGCACTTAGAAAGATGCCAAAGCTAAGGTTACTTGCTTTTGCTAACAACAATGGCTTTGGACAAAAGAGAATTGATTATACGTTGAGTCTTCCAACAAATCTGGAGTTGCCTAATAACTTGAGATACATTCAATGGGATGGATGTCCATTAAAATCTCTATCAACCACTTCTTGGCCAAGCAAGCTTGTTGAACTCTCCATGCCGTATAGTGATCTTGAAAAGCTTTGGGATGAGCCCCTGAATTTTCCAAGTTTGGAGCTAATTTATCTGGCTAGTTCGAAACGAATGATAGAGTGTCCAGATTTGTCCGGTGCTCCAAATCTAAAAGAAGTGTGGGTGAATGGTTGTGACAAATTAACTCATCTTCATCCTTCTATTTTATCTCTTCCAAAGCTTTCAGGGTTATGTGTGTTTCGATGCAAAGAACTTAAGAGCCTTTCTTGCACCACTTGTTCACCATCTCTTAGAGATGTCGTTGCTTATGGTTGCCCAAATCTGCAAGAATTCTCTATCCCAATTTCAAAAGATAATTCTCATATTAATCTGCATTTGAGGTCAACTGCCTTAAACCAACTACCTTCATCAATTGTGCATCTTCAAAATCTTGATAACTTCTCATTTCCAATCAGTGATCTCCTCATGGATCTTCCAGAAAAGTACACCAAACAAATCATGCTTTCAGACCCTAATAATCATGAATCTGACTCAGTGGCCACCTTACGCAGAATACTACCCAGCCCTATGTTCCATTACCTAAAAGAATTGAAATTTGATGGATGTCAAAGTTTAACTGAACTCCCAGACAACATCTCACTGTTATCATCATTGTTGGTGATAAGACTCCACAACACTAATATCATGACCTTTCCAGAAAACATTAAGACTCTTCCGAGACTCAAAATTGTTTTACTTTGTCATTGTGAAAGGTTACAACATGTGCCAACGCTTCCACCTTCCGTTCATCACTTCAAGGCCTGGGACTGCAAATCTTTGAGGACAGTGTCAAGCTCCACAAGTGAACTAAAAAGACAACACGGTACTACTTTTATATTCGTAAACTGCGTGAATTTGGATGAAGAGTCATGCAATACCATTTTGGAAGATGCCATTGTTAGGATGGACACTAGGGCTAAAACACAACAACTCTCACCAAGATTGGAAGAAAACAAAAATGAAGAGTGCACTGTTGTTGATGATGATGATGGCTTTCTTAGTGAGGATAATGCCAACGTTGGCAAGGTTTGTTATTTCTTGCCAATTAGAGGCAGTAAACTTGGTGGCTTATTCCATCGTGGCTCTTCACAAAATTCCATCAGCATTCAACTGCCACAAGGTTCCAATTTCTTTGGCTTCATATTCTACTTGGTTGTTCCACCAATACAACCATGCAATACTGGTGGTGACCTTGACTTTAGGTTTGGGTTTGAATGTTACTTGGAAACAAGTTGGGGTCAAAGGACCCATATAGCAAGTTCGTCCTTAATAGAATGGAGCTGCGAATTTTATTATGGATATCAGATGAATCTTTTGTCGGATCATGTGTTATTATGGTATGATTCACAATGCTGTAAGCAGATAATGGAAATAATCAGAGGAAGAAAGGCCATTGATGATGATGACAAGAATGCAAATCTGGAAGTTAAGTTCTTTGCTCGGCTACCAAACAAGGAAGAAGTGGTGATAAAAGAGTGTGGCATCCGTTGGATATACACAAATATGGAGAAGGAATCAAGAGTGTGCAGGTTCAAGAGAAGCAGGCAAGTTTTCGAGTTAGAAGAAAAGGACTTGGAATCTGATGATGAAGGAGAAGAACTAGTTCCTCCAGCAAAGAAATTTAAGAATAGCTTAATGGAAGTTGAATCAGTAGAAAACTTGAGTTGGACTGATCAGCAAAGAGCGGCTGCAGCGAAGGAAGGTTGGGGTTATAGATTAGTGTTCTCAGTGCAGCTGCTTGGAAGCTTGGAGTATTTCTTGCGGTAG 3654 0.4012 MAFSDVYSPPTPPPPPLTKYDVFISFNGKDTRNGFTSHLHSALCRNQIETFIDYRIEKGGEIWEELVQAIRDSSVYLVIFSEHYASSKWCLRELAEIIELTNMVEKGHHHIIPVFYRIEPTHVRKQTGSYYSVFAEYDRNLDYRLVRQWRKALFHAANISGFEYNHHHSRTESDLIEGIVQMIVRKLDQKYTSELRSPFIHDQNYASIESVLINSQEVRTIGIWGMGGIGKTTIAAAIFQEFSPKYEGSCFLANVREESSRHGLNYIFNRLLSELLQEHVHITTPKIVSSTILRRLRRKKVFIVLDDVNTSELLENLLGVGQDYLGLGSKVIVTTRDKHVLLSRSVDHIHQVTEMNDENSLKLFSLNAFNRTHPPENEYWELSKRALAYARGNPLALKVLGSFLHSKSEKEWDNALTKLKRIPNADIQKVLRLSFNELDDTEKDIFLDIACFFKGEEKEKVIRILNECGFFADIGIRNLLDKALISIATNKSIQMHDLIQEMGHKIVCEESLKNPGKRSRVWHPDEICNILKNDEGSATIETIYLDMTERTEICISSDALRKMPKLRLLAFANNNGFGQKRIDYTLSLPTNLELPNNLRYIQWDGCPLKSLSTTSWPSKLVELSMPYSDLEKLWDEPLNFPSLELIYLASSKRMIECPDLSGAPNLKEVWVNGCDKLTHLHPSILSLPKLSGLCVFRCKELKSLSCTTCSPSLRDVVAYGCPNLQEFSIPISKDNSHINLHLRSTALNQLPSSIVHLQNLDNFSFPISDLLMDLPEKYTKQIMLSDPNNHESDSVATLRRILPSPMFHYLKELKFDGCQSLTELPDNISLLSSLLVIRLHNTNIMTFPENIKTLPRLKIVLLCHCERLQHVPTLPPSVHHFKAWDCKSLRTVSSSTSELKRQHGTTFIFVNCVNLDEESCNTILEDAIVRMDTRAKTQQLSPRLEENKNEECTVVDDDDGFLSEDNANVGKVCYFLPIRGSKLGGLFHRGSSQNSISIQLPQGSNFFGFIFYLVVPPIQPCNTGGDLDFRFGFECYLETSWGQRTHIASSSLIEWSCEFYYGYQMNLLSDHVLLWYDSQCCKQIMEIIRGRKAIDDDDKNANLEVKFFARLPNKEEVVIKECGIRWIYTNMEKESRVCRFKRSRQVFELEEKDLESDDEGEELVPPAKKFKNSLMEVESVENLSWTDQQRAAAAKEGWGYRLVFSVQLLGSLEYFLR 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00677 1217 Pfam TIR domain 19 193 IPR000157 GO:0007165
Arst9g00677 1217 Gene3D - 185 350 IPR027417 -
Arst9g00677 1217 PRINTS Disease resistance protein signature 390 404 - -
Arst9g00677 1217 PRINTS Disease resistance protein signature 852 868 - -
Arst9g00677 1217 PRINTS Disease resistance protein signature 220 235 - -
Arst9g00677 1217 PRINTS Disease resistance protein signature 295 309 - -
Arst9g00677 1217 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 826 IPR044974 GO:0006952
Arst9g00677 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 449 IPR027417 -
Arst9g00677 1217 Gene3D - 17 184 IPR035897 -
Arst9g00677 1217 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Arst9g00677 1217 SMART till_3 19 159 IPR000157 GO:0007165
Arst9g00677 1217 SMART AAA_5 217 356 IPR003593 GO:0016887
Arst9g00677 1217 Pfam NB-ARC domain 207 432 IPR002182 GO:0043531
Arst9g00677 1217 Pfam Leucine Rich Repeat 619 635 IPR011713 -
Arst9g00677 1217 Gene3D - 354 439 IPR042197 -
Arst9g00677 1217 SUPERFAMILY L domain-like 542 901 - -
Arst9g00677 1217 SUPERFAMILY "Winged helix" DNA-binding domain 426 532 IPR036390 -
Arst9g00677 1217 Gene3D Ribonuclease Inhibitor 736 931 IPR032675 -
Arst9g00677 1217 Gene3D Ribonuclease Inhibitor 523 735 IPR032675 -
Arst9g00677 1217 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 162 IPR035897 -
Arst9g00677 1217 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00677 Arst-Chr9 6076359 6089981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00677 6 875 WRKY Transcription Factor Family AT4G12020 30.169 3.74e-93 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00677 - - adu:107464298 2446.77