Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00659 ATGGTTTTTGTGGATCCTTATTATTCATCCTCTTCTCTAATTTCTGATGATCTCAAGAAATACGATGTGTTCATCAGTTTTAGAGGCGAGGACACCCGCGAAAACTTCACAAGCCATCTCCATGCAGCTTTGCGCCGAAACCAAATCGAAACTTACATAGACAACAGGCTTGAGAAAGGAGAAGAGGTTTGGACATCACTTGTCCAGGCCATCAAAGACTCCATTGTTCTCCTTGTTATCTTCTCAGAAGACTATGCTGCTTCGACGTGGTGCTTGAATGAGATCGTTGAGATCATGGAGTGCAACAAGAAGAATGGAGGACAACATGTTATTCCTGTGTTCTATAGAGTGGATCCTTCGCATGTTCGGAGGCAGAAGGGAAGCTATCATGCAGCGTTTGCCATGCATGAGAAGAGTTCTAAGCACTCTCATGAGATGTTGGAAAAGTGGAAGCATGCTCTCTTTCAAGCAGCAAATTTATCTGGCTTTGATTCAAGCACTTACGGGACTGAATCTGATCTTATTGAAGACATAATCCAAATGATTGTCCTGAAATTGGACCACAAACATACAAGTGAACTCAGAAGCCCTTTCATATATGACCAAAACTATGCATGCATTGAATCTGTACTGACTCACCAAGGGGTATATATTAAAACCATTGGGATTTGGGGCATGGGCGGCATTGGAAAAACCACTATTGCGGCTGCCATTTTTCAAGAGTTCTCTCCCAAGTACCAAGGTAGTTGTTTCTTGGCCAATGTAAGAGAAGAATCTTCAAGGCATGGCCTCAACTACATTTTCAATAGACTTCTTTCTGAGTTGCTGCACGAACATGTTCATATTACCACTCCAAAGATTGTGTCTTCTGCTATACTCCGTAGATTGAGGCGTAAGAAAGTTTTCATTGTACTAGATGATGTGAATACTTCTGAGCTTCTAGAAAATTTGCTTGGAGTGGGACAAGATTATCTTGGAGTTGGTAGCAAAGTTATTGTTACCACCAGAGATAAGCATGTTCTTCTGAGTAGATCAGTTGATCATATCCATGAAGTCACAGAAATGAATGATGGGAACTCTATCAAACTCTTTAGCTTGAATGCCTTCAATAGAACCCATCCTCCTGAAAATGAATACTGGGAGCTATCAAAAAGGGCACTTGCTTATGCCAGAGGAAATCCTTTAGCTTTGAAAGTTTTGGGGTCATTTCTTCATTCCAAAACTGAAAAGGAATGGGACAATGCATTGATAAAACTAAAGAGGATTCCTAATGCAGATATTCAGAAAGTGTTGAGGTTGAGTTTCAATGAATTGGATGATACAGAGAAAGATATATTCCTAGATATTGCATGCTTTTTCAAAAGGCAAGAGAAAGAAAAAGTGCAAATGATATTAAACGAGTGTGGTTTCTACGCAGATATTGGAATAAGAAACCTTTTAGACAAGGCTCTTATATCAATAGCTACAAATCAAAGCATACAAATGCATGACTTGATACAGGAAATGGGTCACAAAATTGTGTGCGAAGAATCTCTCAAGAACCCTGGAAAGCGGAGCAGAGTGTGGCAACCAGATGAAGTTTGCGACATATTAAAAAATGATAAAGGATCCACTACTATTGAAACTATATACTTGGATTTGACTCGGCAGACAGAAATATGTATAAGCTCCAATGCATTTAGAAAGATGCCAAACCTAAGGTTACTGGCTTTTGCTAGCAACAATGGTTATGGACAAAAGAGAGTTGATTATATATTGAGTCTTCCAACAAATCTGGAGTTGCCTAATAACTTGAGATATATCCAATGGGATGGATGTCCATTAAAATCTCTGTCAACCACTTCTTGGCCTAGCAAGCTTGTTGAACTCTCCATGCCATACAGTGATGTTGAAAATCTTTGGGATGGGCCACAGAATTTTCCAAGTTTGGAGAAAATATATTTGAATGGCTCGAAACAAATGATAGAATGTCCAGATTTCTCAGGTGCCCCAAATCTAAATTCAATATGGCTGAATGCATGTGAAAGCTTGATTCAAGTTCATCCTTCTATTTTCTCCCTTCCAAAACTTGACTATTTAGCTGTGCACGGATGCAAAAAACTTAAGAGCCTTTCCAGCAACAATTTTTCATCGTTTCTTCGCGCAGTGGTTGCCTACGATTGCCCAAATCTGGAAGAATTCTCAATCCCAATTTCAACAAATCAGTCCAATATTCATGTCCATTTGAGGTCAACTTCCTTGAAACAACTACCATCATCAATTGTGCATCTTAAAGATCTTACAAACTTCTCATTTCCAATAAGTGATCTCCTTATGGATCTTCCTAAAAAGTACACCAATCAAATCATGCTTTCAGACCCTAATAATCATGCATGTGACTCAGTGGCCACCTTACGTTCAATCCTACCTAGCTCTATCTTCCGTTATCTAAAACAACTGAAATTTGATGGATGCCAAAGTTTAACCGAACTCCCAGATAGCATTTCTTTGTTATCATCATTGTTGTTCATAATCCTGCATAACACTAATATCATGACCTTTCCAGAAAGCATTAAAACTCTTCCACGGCTCAAGATTGTTGTGATCTGTCATTGTGAAAGGTTACAACTTTTGCCAGCGCTTCCACCTTCCGTTCATGACTTCAAGGCCTGGGACTGCAAATCTTTGAGGACAGTGTCAAGTTCCACAGAACAACTACAGAGACAGCACGGTACTACTTTTATGTTCCTAAACTGCGTGAAGTTGGATGAAGAGTCCTACTTTACCATTTTGAAAGATGCCATTATTAGGATGGAAATTAGGGCTAAAGCACAACAACTATCACCAAGATTAGAAGAAAACAGAATTGAAGGATGCACTGTTGTTGATGATGGTGATGGTTATGTCAGTGAGTGTTCCTGCCTGGTTATGGCCGAGCTATTCTTCGTCTTTAAGGGTTGGTCGGCCGAGCTATACTTCGTTCCGAAGAAGGAGTGTCCCGACCTAGGGAGTGGATCACAATGCACCTTGATCACCAAATGA 3021 0.3979 MVFVDPYYSSSSLISDDLKKYDVFISFRGEDTRENFTSHLHAALRRNQIETYIDNRLEKGEEVWTSLVQAIKDSIVLLVIFSEDYAASTWCLNEIVEIMECNKKNGGQHVIPVFYRVDPSHVRRQKGSYHAAFAMHEKSSKHSHEMLEKWKHALFQAANLSGFDSSTYGTESDLIEDIIQMIVLKLDHKHTSELRSPFIYDQNYACIESVLTHQGVYIKTIGIWGMGGIGKTTIAAAIFQEFSPKYQGSCFLANVREESSRHGLNYIFNRLLSELLHEHVHITTPKIVSSAILRRLRRKKVFIVLDDVNTSELLENLLGVGQDYLGVGSKVIVTTRDKHVLLSRSVDHIHEVTEMNDGNSIKLFSLNAFNRTHPPENEYWELSKRALAYARGNPLALKVLGSFLHSKTEKEWDNALIKLKRIPNADIQKVLRLSFNELDDTEKDIFLDIACFFKRQEKEKVQMILNECGFYADIGIRNLLDKALISIATNQSIQMHDLIQEMGHKIVCEESLKNPGKRSRVWQPDEVCDILKNDKGSTTIETIYLDLTRQTEICISSNAFRKMPNLRLLAFASNNGYGQKRVDYILSLPTNLELPNNLRYIQWDGCPLKSLSTTSWPSKLVELSMPYSDVENLWDGPQNFPSLEKIYLNGSKQMIECPDFSGAPNLNSIWLNACESLIQVHPSIFSLPKLDYLAVHGCKKLKSLSSNNFSSFLRAVVAYDCPNLEEFSIPISTNQSNIHVHLRSTSLKQLPSSIVHLKDLTNFSFPISDLLMDLPKKYTNQIMLSDPNNHACDSVATLRSILPSSIFRYLKQLKFDGCQSLTELPDSISLLSSLLFIILHNTNIMTFPESIKTLPRLKIVVICHCERLQLLPALPPSVHDFKAWDCKSLRTVSSSTEQLQRQHGTTFMFLNCVKLDEESYFTILKDAIIRMEIRAKAQQLSPRLEENRIEGCTVVDDGDGYVSECSCLVMAELFFVFKGWSAELYFVPKKECPDLGSGSQCTLITK 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00659 1006 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Arst9g00659 1006 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 163 IPR035897 -
Arst9g00659 1006 Pfam Leucine Rich Repeat 619 636 IPR011713 -
Arst9g00659 1006 SUPERFAMILY "Winged helix" DNA-binding domain 426 532 IPR036390 -
Arst9g00659 1006 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 188 - -
Arst9g00659 1006 Gene3D - 200 349 IPR027417 -
Arst9g00659 1006 SMART AAA_5 217 354 IPR003593 GO:0016887
Arst9g00659 1006 Gene3D Ribonuclease Inhibitor 709 904 IPR032675 -
Arst9g00659 1006 Gene3D Ribonuclease Inhibitor 535 708 IPR032675 -
Arst9g00659 1006 Pfam NB-ARC domain 213 431 IPR002182 GO:0043531
Arst9g00659 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 764 IPR044974 GO:0006952
Arst9g00659 1006 Gene3D - 18 193 IPR035897 -
Arst9g00659 1006 SMART till_3 20 160 IPR000157 GO:0007165
Arst9g00659 1006 Pfam TIR domain 20 192 IPR000157 GO:0007165
Arst9g00659 1006 PRINTS Disease resistance protein signature 685 701 - -
Arst9g00659 1006 PRINTS Disease resistance protein signature 295 309 - -
Arst9g00659 1006 PRINTS Disease resistance protein signature 390 404 - -
Arst9g00659 1006 PRINTS Disease resistance protein signature 220 235 - -
Arst9g00659 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 449 IPR027417 -
Arst9g00659 1006 Gene3D - 355 439 IPR042197 -
Arst9g00659 1006 SUPERFAMILY L domain-like 544 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00659 Arst-Chr9 5891355 5895994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00659 6 857 WRKY Transcription Factor Family AT4G12020 31.561 2.90e-101 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00659 - - adu:107464298 1499.18