Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00643 ATGGGTATGGATAATTTAAGAACATTAGTTATTTGGTTCTTTCTCATGTCCTGCATGAGAACCACCACTTCATCAGACAGCCTGGGAATGGCACAATATATCCGAGACGGTGAATCTTTAGTCTCAGCTGGTGGAAGCTCTGAACTTGGTTTCTTCAGCCCCGGAACTTCGACAAGTCGATATTTGGGTGTGTGGTACAGAGATACATCAGGAAATCCAACAGTTGTGTGGGTAGCTAACAGAGAAAGACCCCTTCACAACAAGTCAGGAGTGTTGCAATTCAGCAAAATGGGGATTCTTCAGCTTCTTGATGAGACAAACAACACTGTTTGGTCGTCCAACATATCCAGCAAATCCTGGAGTAACTCAATTGCACGGATTTTGGATTCGGGAAATCTTGTAGTGACAAATGGGAAAAATATTTATAACAGCAGCTTTTTGTGGCAGAGTTTTGATTACCCTTGTGATACATTGATGCCTGGAATGAAGATTGGATGGAACTTTGTTACTGGTCAGGAAAAATATGTATCAAGCTGGAAAAGTGAAGAAGATCCTGCTGTGGGAGAGTATACTATAAAAATTGATCCTAGAGGATATCCACAAATAATGGTAATGAAAGGATCTCTTATATCTTTTAGAGGTGGATCATGGAATGGCCTTTATTTTACTGGATCTCCATCTCAGAACACACAAACATTTAGATCCAATTTTGTATTGAATGGAAAAGAGGTGTATTATGAGTTTGAAATGCTTGATACTTCCATTTTCACAGTACTTAAAGAATACCCTTCTGGTAATGGACAATATCTGGTTTGGACAAGCCAAACAAGAAACAAGGTACAAGTTACCCAGGTTGCGAACCAAGGTGGGTGTGAAAGGTATGCCTATTGTGGTTCAAATGCTATATGCATTGTGGACAGTAATGTTGCAATATGCAAGTGTCTGAAAGGGTATATTCCCAATCCCAGTTTTCCTAAACCACAAAATATGTCATATTGGTCCAATGGTTGTGAGAGACAGGTTGCACTGAGTTGCAATAACACCAATAGCTTCTTGAGGTACACAGGCATAAAATTGCCAGACACATCTTCTTCATGGTATAGTGAGATAATGAACCTCCAGGAATGTCAAAAGTTTTGCCTGAAAAACTGTTCTTGTTCAGCATATTCAAGTTTGGATATTCGTAATGGAGGAAGTGGTTGTCTAATTTGGTTTCATAATCTTACTGACATTATACAATTCTCACAAGGGGGTCAAGACCTTTACCTAAAAGTCCCTTCTTCAGAATTGGCTGCTAATGGCCATGGAAACATCAAGCAAAAGAAGGTAGGAATTGCAGTTGGTGTGATTATTTTCGGATTAATCACATGTGTCAGCATAATGATTATACATCCAGGGACAAGAAAAATAATTTACAGAGAAAAACAGATGCAAGAAGATATTGATCTACCAGCATTCAATTTCTCAGTCTTAGCTAAAGCTACCGAAAAATTTTCAAGCAGTAACAAACTTGGAGAAGGTGGTTTTGGAGAAGTATACAAGGGTACATTGACTGATGGGCAAGAGTTAGCCATAAAGAGACTTTCAAAAAAGTCTGGCCAAGGGTTGGAAGAGTTCAAAACTGAAGTAGCGTTGATGGCCAAACTTCAGCATCGTAATCTTGTGAAGCTTCTTGGTTTTTGCATTCAAGGAGTAGAAAAAATATTGGTCTATGAATACATGCCGAACAAAAGCCTGGACTACTTCATTTCTGATGAAATTAGAAGGAAGTTGCTAGATTGGCCTAAACGTTTCAACATTATTAGCGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATTATTCATAGAGATCTAAAAACCAGCAACATTTTGCTGGACGCAAATTTGAATCCTAAAATATCAGACTTTGGCTTGGCACGAACATTCTTAGGCGATCAAGTGGAGGCTAACACAAACAGGATAGCTGGAACATATGGTTATATGCCTCCTGAGTATGCAGTACATGGGCAATTCTCAATGAAGTCTGATGTGTTTAGCTATGGTGTGATAGTACTAGAGTTGTTAAGTGGAAAGAAGAACAGGGAATTCTCCGACCCGGAAAACTACCTTAATCTTCTTGGACATGCATGGAGATTATGGACTGATGACAGACCATTGGAGCTATTGGATGAATTGTTAAAGGGATGCACCCATTCTGAGGTCATAAGATGCATACAAGTCGGCCTATTATGCGTGCAACAAAGACCAGAAGACCGACCAGACATGTTATCTGTGGTCCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAGGTCCCTGGTTTTTATATTGAAAGAGGTGTTACAATTGAAGTAGATACTTTGTCGGGAAACGGCACACCGTTTTCAGCCAACGAAATTTCCATGACATTGTTAAATGCAAGATAG 2448 0.3934 MGMDNLRTLVIWFFLMSCMRTTTSSDSLGMAQYIRDGESLVSAGGSSELGFFSPGTSTSRYLGVWYRDTSGNPTVVWVANRERPLHNKSGVLQFSKMGILQLLDETNNTVWSSNISSKSWSNSIARILDSGNLVVTNGKNIYNSSFLWQSFDYPCDTLMPGMKIGWNFVTGQEKYVSSWKSEEDPAVGEYTIKIDPRGYPQIMVMKGSLISFRGGSWNGLYFTGSPSQNTQTFRSNFVLNGKEVYYEFEMLDTSIFTVLKEYPSGNGQYLVWTSQTRNKVQVTQVANQGGCERYAYCGSNAICIVDSNVAICKCLKGYIPNPSFPKPQNMSYWSNGCERQVALSCNNTNSFLRYTGIKLPDTSSSWYSEIMNLQECQKFCLKNCSCSAYSSLDIRNGGSGCLIWFHNLTDIIQFSQGGQDLYLKVPSSELAANGHGNIKQKKVGIAVGVIIFGLITCVSIMIIHPGTRKIIYREKQMQEDIDLPAFNFSVLAKATEKFSSSNKLGEGGFGEVYKGTLTDGQELAIKRLSKKSGQGLEEFKTEVALMAKLQHRNLVKLLGFCIQGVEKILVYEYMPNKSLDYFISDEIRRKLLDWPKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQVEANTNRIAGTYGYMPPEYAVHGQFSMKSDVFSYGVIVLELLSGKKNREFSDPENYLNLLGHAWRLWTDDRPLELLDELLKGCTHSEVIRCIQVGLLCVQQRPEDRPDMLSVVLMLNGEKLLPKPKVPGFYIERGVTIEVDTLSGNGTPFSANEISMTLLNAR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00643 815 Gene3D - 20 151 IPR036426 -
Arst9g00643 815 Pfam D-mannose binding lectin 74 180 IPR001480 -
Arst9g00643 815 Gene3D Phosphorylase Kinase; domain 1 466 573 - -
Arst9g00643 815 SMART serkin_6 498 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00643 815 ProSiteProfiles PAN/Apple domain profile. 345 427 IPR003609 -
Arst9g00643 815 CDD STKc_IRAK 504 770 - -
Arst9g00643 815 SUPERFAMILY Protein kinase-like (PK-like) 481 768 IPR011009 -
Arst9g00643 815 CDD PAN_AP_plant 341 426 - -
Arst9g00643 815 SMART blect_4 31 154 IPR001480 -
Arst9g00643 815 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Arst9g00643 815 Gene3D Hepatocyte Growth Factor 342 422 - -
Arst9g00643 815 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 755 - -
Arst9g00643 815 Gene3D Transferase(Phosphotransferase) domain 1 574 774 - -
Arst9g00643 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 573 - -
Arst9g00643 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Arst9g00643 815 Pfam PAN-like domain 345 411 IPR003609 -
Arst9g00643 815 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Arst9g00643 815 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Arst9g00643 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 344 425 - -
Arst9g00643 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 151 - -
Arst9g00643 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 185 IPR036426 -
Arst9g00643 815 PIRSF SRK 2 815 IPR024171 GO:0004674
Arst9g00643 815 Pfam Protein tyrosine and serine/threonine kinase 501 739 IPR001245 GO:0004672|GO:0006468
Arst9g00643 815 CDD B_lectin 32 154 IPR001480 -
Arst9g00643 815 SMART ntp_6 346 425 IPR003609 -
Arst9g00643 815 FunFam - 574 777 - -
Arst9g00643 815 ProSiteProfiles Protein kinase domain profile. 498 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00643 815 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00643 Arst-Chr9 5697630 5701192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00643 486 815 Receptor kinase-like Gene Family AT4G23140 57.018 5.66e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g00643 PK_Tyr_Ser-Thr 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00643 - - aip:107614884 1627.07