Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00642 ATGATGAACAATTACTCAAGAATGTTGCTACTCATTTGGTTTTCTCTCATATCTTGCTTTAAAACCACCGCTTCAAAAGATAGCTTAAGAATGAGTGAGTATATTCGAGATGGCGAGACTTTAGTCTCGGCAGGTGGAAGCTTTGAAGTTGGTTTCTTCAGCCCCGGAGCTTCGACTCGCCGGTACTTGGGCTTGTGGTATAGAGATGCATCAAGAAACAACACAATTATGTGGGTGGCCAATAGAGAAAGACCCCTTCACAATAAGTCAGGTGTTTTGATATTCAAAGAAACAGGGGATCTTCAACTTCTTAGTGACACAAACAACACCATTTGGTCATCCAATATCTCAAGCAAAGCCTTGAGTAACTCGGTTGCACAGCTCTTGGATTCAGGGAATCTTGTGGTGAAAAATGTACCAGATACCAAGGAGGGAAGCTTTTTGTGGCAGAGTTTTGATTATCCATGCGATACGTATATTCCAGGGATGAAATTCGGCCGAGACTTAGCTACCGGCCTAGACAGATCGCTTTCGTGCTGGAAAAGTACAGAGGATCCTGCTGTGGGAGAATATTCTCTAAGAGTTGATCCTAGGGGATATCCACAGGTAATGCAAATGAAGGGTTCTGTTATAATTAGTAGAATAGGATCATGGAATGGCATTTATTTTACTGGAACTCCAGTTGAAGGCATGAGCATACTTAAGCGTAATTTCGTGTTGAATTCGAAAGAAGTGTATTTTGAGTTTGAAATACTTGATAGGTCCATCTTCTCCATACTCAAAACAAACCCTTCTGGAGATGCACAAGTTATGACTTGGACAAGTCAAACAACAAGCCGGGTTGAAGTTTCCCTAACCGGCGGGCAGTATGCCTGTGGAAGTTATGCCTTGTGTGGTTCAAATTCTGTATGTAGCATGGCTGCTGATGTTGCAACATGCGATTGCGTAAAAGGATACACTCCAAAGTTTCCTGAAAAATGGTACATCTCAGATTGGTCTAGTGGGTGTTCTAGAAAGGTTGCATTGGATTGTGATGATGTAGTAGGGTTCTTGAAGTACAGTGACATGAAATTGCCAGACACATCTTCTTCATGGTATAGTGAGACAATGAACCTTGAAGAATGTCAGAAGTTATGTCTCAAAAATTGTTCTTGTACAGCATATGCAAATTTGGATATCCGCAATGGAGGGAGTGGTTGCCTACTTTGGTTTGGTAATCTTACTGACATGATGCAATTCTCAAAAGGGGGTCAAGACCTTTACATCAAAGTCCCTGCTTCAGAATTAGGTACTTTTCCTTGTAATAGCCATGGAAATACGAATAAAAAGAAGATAGGAATTGCAGTTGGTGTGGGTATTTTTGGATTAGCAACATCCATCGCCATAACAACAATAATTAGAAATCCAGGTAAATACTCAGCAAGAATACTTAACAGACATAAGCAAAGACAAGAAGATATCAACCTACCAAAATTTGATTTCTCACTCTTAGCCAAAGCTACTGAAAACTTCTCAAACAATAATAAACTTGGAGAAGGTGGTTTTGGACCGGTATACAAGGGTAAGATGATAGATGGCCAAGAGATAGCTGTGAAAAGACTTTCTAAAAAATCTGGACAAGGGTCGGAAGAGTTCAAGAATGAAGTGATGTTGATAGCTAAACTTCAGCATCGTAATCTCGTGAAGCTTCTTGGCTACTGCATTCAAGGGGAAGAAAAAATATTAATCTATGAGTATATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGGTGAAGTCAGAAGAAAGTTGCTAGATTGGCCGAAACGTTTCAACATTATTAGTGGTATTGCTCGAGGACTTCTTTATCTTCATCGAGATTCTAGACTAAGGGTTATTCATAGAGATTTAAAAACTAGCAATATCCTACTAGATGTTGATTTGAATCCAAAAATATCAGACTTTGGGTTGGCTCGAACATTCTCATGTGATCAAGTCGAGGCTAACACCGATAGGGTGGCTGGAACATATGGTTATATGTCTCCTGAGTATGCAGTGCATGGACAATTCTCATTAAAATCTGATGTCTTTAGCTACGGTGTAATAGTACTAGAGTTGGTAAGTGGACTAAAAAACAGGGAATTTTCAGACCCAGAAAACAATCTTAATCTTCTTGGACATGCATGGCAACTATGGACAGATGAGAGGCCACTAGAACTATTGGATGAAGAGTTAAAGGCAGGATGCATCCCTACCGAAGTCATACGGTGCATACAAGTGGGTCTGTTATGA 2271 0.4003 MMNNYSRMLLLIWFSLISCFKTTASKDSLRMSEYIRDGETLVSAGGSFEVGFFSPGASTRRYLGLWYRDASRNNTIMWVANRERPLHNKSGVLIFKETGDLQLLSDTNNTIWSSNISSKALSNSVAQLLDSGNLVVKNVPDTKEGSFLWQSFDYPCDTYIPGMKFGRDLATGLDRSLSCWKSTEDPAVGEYSLRVDPRGYPQVMQMKGSVIISRIGSWNGIYFTGTPVEGMSILKRNFVLNSKEVYFEFEILDRSIFSILKTNPSGDAQVMTWTSQTTSRVEVSLTGGQYACGSYALCGSNSVCSMAADVATCDCVKGYTPKFPEKWYISDWSSGCSRKVALDCDDVVGFLKYSDMKLPDTSSSWYSETMNLEECQKLCLKNCSCTAYANLDIRNGGSGCLLWFGNLTDMMQFSKGGQDLYIKVPASELGTFPCNSHGNTNKKKIGIAVGVGIFGLATSIAITTIIRNPGKYSARILNRHKQRQEDINLPKFDFSLLAKATENFSNNNKLGEGGFGPVYKGKMIDGQEIAVKRLSKKSGQGSEEFKNEVMLIAKLQHRNLVKLLGYCIQGEEKILIYEYMPNKSLDYFVFGEVRRKLLDWPKRFNIISGIARGLLYLHRDSRLRVIHRDLKTSNILLDVDLNPKISDFGLARTFSCDQVEANTDRVAGTYGYMSPEYAVHGQFSLKSDVFSYGVIVLELVSGLKNREFSDPENNLNLLGHAWQLWTDERPLELLDEELKAGCIPTEVIRCIQVGLL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00642 756 CDD PAN_AP_plant 340 425 - -
Arst9g00642 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Arst9g00642 756 Pfam Protein tyrosine and serine/threonine kinase 507 702 IPR001245 GO:0004672|GO:0006468
Arst9g00642 756 Pfam D-mannose binding lectin 75 181 IPR001480 -
Arst9g00642 756 ProSiteProfiles Protein kinase domain profile. 504 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00642 756 Pfam PAN-like domain 347 410 IPR003609 -
Arst9g00642 756 Gene3D - 21 152 IPR036426 -
Arst9g00642 756 PIRSF SRK 1 756 IPR024171 GO:0004674
Arst9g00642 756 SMART serkin_6 504 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00642 756 CDD B_lectin 32 155 IPR001480 -
Arst9g00642 756 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 186 IPR036426 -
Arst9g00642 756 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Arst9g00642 756 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Arst9g00642 756 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 756 - -
Arst9g00642 756 SMART blect_4 32 155 IPR001480 -
Arst9g00642 756 Gene3D Hepatocyte Growth Factor 341 421 - -
Arst9g00642 756 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 579 - -
Arst9g00642 756 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Arst9g00642 756 SMART ntp_6 345 424 IPR003609 -
Arst9g00642 756 SUPERFAMILY Protein kinase-like (PK-like) 485 752 IPR011009 -
Arst9g00642 756 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 152 - -
Arst9g00642 756 Gene3D Transferase(Phosphotransferase) domain 1 580 756 - -
Arst9g00642 756 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Arst9g00642 756 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 424 - -
Arst9g00642 756 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Arst9g00642 756 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00642 Arst-Chr9 5692914 5695917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00642 491 756 Receptor kinase-like Gene Family AT4G05200 61.654 4.15e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g00642 PK_Tyr_Ser-Thr 9.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00642 - - aip:107614884 1424.84