Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00619 ATGGCAAAAGATGATGATGAAATGCCTAAGATCCTTCATGGAACAATTGAAGCTACCATCTTCAATGCCTCATCACCTCCCTCTTCTTCTTCATTTCCCTTCAAGTGTCTATGTTTAAAAGCAGAAAAACCAGCTTATGTGACAATCAAGATAGACAAGAACAAGGTTGCAAAAACAATTGAAGACATTGATCGTGTATGGAACCAAACGTTCAAGATCCAATGTGCATACCCAATTGATTCAACAATCACAATAACACTCAAAACAAAAACTTGCACATTAGGAAAGTACCACATAAAAGGCCAAAAGCTTCTAGAAGAAGGAGGCTTAATCAATGGATTCATCCCTCTATTAATGCAAGATAATAATGGGAAAAAACCAAACCAAAAACTCAAATTGAAGTTCCAGTTATGGTTCAATTCAGCTGAAGAATTATTGGAACCAATAAGTTGGGCAAAGATAATGAGGTTTGGGAATTGTTGTCAAGGAATGAGAGATTCTTCTACTACATTTCCACAAAGGTCTAATTGTTATGTCAAACTATATCATGATGCTCATCATTGTTCTACTTTTCAACCAAATATAACTGGTTTATTATGTGAAGCTCCAAGGAAGCTATGGGAGGATGTGTATAAAGCTATTGAGGGTGCAAAGCATATAATTTATATTGCAGCCTGGTCCCTCAATCCAAACTTGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCCAAAGGAATAAAGCTTGGTGATTTATTGAAGAAGAAAGCAGAGGAAGGTGTTGCTGTGAGGATTATGCTTTGGGATGATGAAAAATCTTTGCCCTTTATTAAGAAGAACAAAGGTGTAATAACAAACAATAATAATGCACAACATCATGATGATGATGATGATGATGATGCTTTTGCTTACTTCAAGAAAACAAGAGTAATATGCACAAAGTGTCCTAGGTTGCACCACAAATTCCCAACACTCTTTTCTCACCACCAAAAGACTATAACATTGGACACAAAATCACCAAATAATTCTAGTGATGATGATGGTGAAGATGAGAGAGAACTAATGAGCTTTTTGGGAGGATTAGATTTGTGTGAAGGAAGATATGACACTGAGCAACATTCATTGTTTCACACACTGATTAGGGAATCACATTGTTATGATTTTTACCAACCAAACATTGGAGGAGCTAGTCTTAACAAAGGAGGGCCAAGAACACCTTGGCATGATGCTCATGCTTGTGTTATTGGTGAGGCTGCTTGGGATGTGTTGACCAACTTTGACCAAAGGTGGAGAAAGCAATGTGATTCTTCTTTTCTTGTTCCTACTACCACCATTGCAAATGTTGTTGGGCCAAGGAATAGCACAACTTCAAACACTTCCATAGACAAGGATTGGAATTGGAAAGTTCAAGTATACAGGTCAATTGATGATGTGTCAGCTAGCTTCCAAAGCCAATCATTTAGAGAGTTACATGTAGAAAGGAGCATCCATGAGGCTTATGTTGAAGCAATAAGAAGTGCTGAAAAGTTTATATACATTGAGAATGAATATTTCATTGGAGGGTGCCAATTATGGGACAAAGATAGGGATAGTGGATGCACAAACCTAATCCCAATTGAAATTGCACTCAAAATTGTTAGCAAGATCAAAGCAAAAGAGAGCTTTGCAGTGTACATAGTGATACCAATGTGGCCAGAGGGAGTGCCTAAAAGTGAAGCAGTTCAAGATATATTGCATTGGACTAGAGAAACTATGACTATGATGTATAGGTTAATTGGAGAAGCATTGAAGGAGAATGGGGAGAATAATAATAATGGTCACCCTAAAGATTATTTGAATTTCTTTTGCCTTGCAAATAGGGAACAAAAGGGGAGTGGGGAGTATATTCCACAACATGCTCCTCATCCTGGAACACTTTATGGGAATGCACAAAGTAATAGGAGGTTCATGGTTTATGTTCACTCCAAGTTCATGATAGTGGACGATGAATACATACTAATAGGATCAGCAAATGTGAACCAAAGATCCATGGATGGAGAAAGGGACAGTGAGATTGCCATAGGCTGCTACCAATTATCTCAAGATAATAAACATGAAGGTATGAGCCGTGGTGAGATTCATGCATTTAGAATGTCACTATGGTATGAACACACTGCTAGTAGTGCCAATTATGACTTGTTCTTGGAGCCACAAAGCTTGGAATGTGTCAACATTATGCGTTCAATTGGTGACAAAATGTGGCAAATTTACATCAATGATGAAATTGTGGACATGGAAGGTGTGCACCTTGTGACTTCTTTACAAATTAAATTATATATATAA 2325 0.3755 MAKDDDEMPKILHGTIEATIFNASSPPSSSSFPFKCLCLKAEKPAYVTIKIDKNKVAKTIEDIDRVWNQTFKIQCAYPIDSTITITLKTKTCTLGKYHIKGQKLLEEGGLINGFIPLLMQDNNGKKPNQKLKLKFQLWFNSAEELLEPISWAKIMRFGNCCQGMRDSSTTFPQRSNCYVKLYHDAHHCSTFQPNITGLLCEAPRKLWEDVYKAIEGAKHIIYIAAWSLNPNLVLVRDPQTEIPHAKGIKLGDLLKKKAEEGVAVRIMLWDDEKSLPFIKKNKGVITNNNNAQHHDDDDDDDAFAYFKKTRVICTKCPRLHHKFPTLFSHHQKTITLDTKSPNNSSDDDGEDERELMSFLGGLDLCEGRYDTEQHSLFHTLIRESHCYDFYQPNIGGASLNKGGPRTPWHDAHACVIGEAAWDVLTNFDQRWRKQCDSSFLVPTTTIANVVGPRNSTTSNTSIDKDWNWKVQVYRSIDDVSASFQSQSFRELHVERSIHEAYVEAIRSAEKFIYIENEYFIGGCQLWDKDRDSGCTNLIPIEIALKIVSKIKAKESFAVYIVIPMWPEGVPKSEAVQDILHWTRETMTMMYRLIGEALKENGENNNNGHPKDYLNFFCLANREQKGSGEYIPQHAPHPGTLYGNAQSNRRFMVYVHSKFMIVDDEYILIGSANVNQRSMDGERDSEIAIGCYQLSQDNKHEGMSRGEIHAFRMSLWYEHTASSANYDLFLEPQSLECVNIMRSIGDKMWQIYINDEIVDMEGVHLVTSLQIKLYI 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00619 774 Pfam Phospholipase D Active site motif 653 677 IPR001736 GO:0003824
Arst9g00619 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 121 IPR035892 -
Arst9g00619 774 Pfam Phospholipase D C terminal 726 765 IPR024632 -
Arst9g00619 774 SUPERFAMILY Phospholipase D/nuclease 463 727 - -
Arst9g00619 774 Gene3D Endonuclease Chain A 489 699 - -
Arst9g00619 774 Gene3D Endonuclease Chain A 192 475 - -
Arst9g00619 774 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 650 677 IPR001736 GO:0003824
Arst9g00619 774 SUPERFAMILY Phospholipase D/nuclease 178 440 - -
Arst9g00619 774 SMART pld_4 325 368 IPR001736 GO:0003824
Arst9g00619 774 SMART pld_4 650 677 IPR001736 GO:0003824
Arst9g00619 774 PANTHER PHOSPHOLIPASE D 11 768 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00619 Arst-Chr9 5411691 5417026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00619 35 765 Phospholipase D Gene Family (Wang group) AT1G55180 57.859 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00619 K01115 - gmx:100812642 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00619 9 5411691 5417026 Arst9g00619 9 5411691 5417026 ECH
Arst8g01407 8 23234380 23237263 Arst9g00619 9 5411691 5417026 PCT