LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g00614	ATGAGTCGAGAGCAACAGAAGGGGATAGGGAAGCAAGTCAAAGGCTCCGATGGCGCTGAGAAGGTTATCGTTGCCGTTAAGGCGTCGAAAGAAATTCCGAGGACTGCACTTGTTTGGTCCCTCACTCATGTTGTTCAACCTGGAGATTGCATCACCCTGCTAGTGGTTGTGCCTTCTCAAAGTTCAGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGATTGTGCCAGTATCAGTAAAAAGTATCCTCCAGGAACAGTTTCAGAGCAGAAGCATGATATCACTGATTCTTGTTCTCAAATGATCCTTCAGCTCCATGACGTGTATGATCCGAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCTCCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCGCAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAAGAAAAGCGATGCATGGAAGAGCTACAGTGTAATATTGTGGTCATGAAGCGTTCCCAACCAAAAGTACTCCGCTTGAATTTGATTGGATCGCAAAAGGAAGCTGATGAATCACGTCCATTGCCTTCTGAGCATGATGAGCTGGCTGGAAATCAAACCAAAAAGAATACTGATTCACTAAATTCCATTAAGGGGCCTTCTGTAACTCCAACTAGCAGCCCGGAGCAAGGGACTCCATTTACTGCAACGGAAGCTGGAACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTTATCTCAGAGACAAATGGTGAGTTGAAGAAAGAGGAGACTATCAAAGAAAATCAAGAACTTGATGATTCAGACACAGAAAGTGAAAGTTTGTCCACATCTTCGGCAAGCTTGAGATTCCAGCCATGGATCACAGAATTACTTTTACATCAACAATCATCTCAACGAAACGAAGAAAGGCCAGAAATTTCTCAAGATATGCCTCAAACATCTACAACTAGAGCCTTGCTAGAAAAGTTCTCAAGGCTCGATCGAGGAGCTGGAATTGAAATATCAAATTATAGAAATGAGTCAGATTTTAGTGGAAATCTCAGAGAGGCAATATCATTATCTAGAAATACTCCGCCTGGTCCACCTCCATTATGTTCGATATGTCAACACAAGGCACCTGTTTTCGGAAAACCTCCAAGATGGTTCAGCTATGCCGAGTTAGAACTTGCCACTGGTGGATTTTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCGGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGCATAGAGGATAAGAGAAGGCTACTAGTTTACGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAAAAAGCTGATGTTTATTCATTCGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTCTATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGCGGTCCTCTGTTAGAAGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATACAGGCCTGCATATTGGGATAGGGACAACAAAGCAAGAAGGACTTCATGTGAAGATAACATTTAA	2247	0.4486	MSREQQKGIGKQVKGSDGAEKVIVAVKASKEIPRTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASISKKYPPGTVSEQKHDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGSQKEADESRPLPSEHDELAGNQTKKNTDSLNSIKGPSVTPTSSPEQGTPFTATEAGTSSVSSSDPGTSPFFISETNGELKKEETIKENQELDDSDTESESLSTSSASLRFQPWITELLLHQQSSQRNEERPEISQDMPQTSTTRALLEKFSRLDRGAGIEISNYRNESDFSGNLREAISLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSEANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYRPAYWDRDNKARRTSCEDNI	748

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Arst9g00614	748	PANTHER	OS01G0750732 PROTEIN	164	679	-	-
Arst9g00614	748	MobiDBLite	consensus disorder prediction	301	321	-	-
Arst9g00614	748	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	522	534	IPR008266	GO:0004672\|GO:0006468
Arst9g00614	748	Gene3D	Phosphorylase Kinase; domain 1	373	476	-	-
Arst9g00614	748	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	477	680	-	-
Arst9g00614	748	Gene3D	Transferase(Phosphotransferase) domain 1	477	683	-	-
Arst9g00614	748	SUPERFAMILY	Protein kinase-like (PK-like)	385	683	IPR011009	-
Arst9g00614	748	CDD	STKc_IRAK	407	673	-	-
Arst9g00614	748	MobiDBLite	consensus disorder prediction	181	286	-	-
Arst9g00614	748	MobiDBLite	consensus disorder prediction	187	202	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g00614	Arst-Chr9	5367677	5373524	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g00614	381	675	Trihelix Transcription Factor Family	AT1G70460	54.967	1.16e-103	332

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Arst9g00614		PK_Tyr_Ser-Thr	2.7e-41	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g00614	-		-	gmx:100816340	1320.84

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