Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00612 ATGGAAGGAAGCCAAAGGGAGGAGGGGTGTAGGCCTGATGAGGAATTGGATGATGCATGTGGCGGTGACAGCATGAATGGAGTATCGGATGAGTATCCATCCGATTATGCTTATGTATTCGGGTTGTCAGAACAAGATATAATAAGAAAAGTCTTTCGAAGTGAGGAAAGAGCATATGATTTTTACAGTAAATTTGGCAGATGTCATGGATTTGGCGTGCGCAAGGGTGATTATGGAAAGGATGAAGAAGGAAATTTGATAAGGAGAAGGTTTTTTTGTAATAGGGCCGGACTGAGAGATGAGAAACACTTGAACAGGTTGGATAGAAAAAGGGGACACCGTCCTGAAACAATGACTAATTGCTTGGCGAAGCTGTCGATTTATCTGGATAGGGAAAACTCAACATGGAAGGTTCGCAAAGTAATCTTGGATCACAATCATGAACTGACACCTCGAAGGATGGTGCACATGATTCCGAAATTCCGTCGTATATCGGATGCTGCAAAGGCAAACATAGATGGCATGCGTGGGTATGGTGTTTCGACATCAAAGATTTTGGGTTACATGGCTGGGGTTGCCGGAGGGTACTCTTTGTTGGGCTTTACAAAAAAGGATGCATACAACTACATTGATCACATGAGGCGGGCCAAGGTCGTTAATGGTGACTCGAATGCCGCTATTGTATATCTAGAGGGAAAGGCAGCGGCGGATCCAATGTCAATGGCTAGGTATAATGTTACAAAGGATGGAATGTTGGCGAACATGTTCTGGGCTGATGGACCTTGCAGAGTAGACTATCAGTATTTTGGGGATGTGGTCGCCTTTGACTCGACATACAAGAAGAATAAGTACCAGCGCCCGTTAGTGATATTCTCTGGGTCAAACAATCATAAGCAAACCACGATATTCGGATTTGGATTGGTGCTAGATGAAACAATAGAAAGTTATACGTGGATGTTGGAGAATTTGTTGGAGGTGATGTGTAATAAGCAGCCTTCTGTTGTGGTAACTGATGGCGATGATGCGATGATTGCGGCAGTCAAAAAAGTGTTTCCAGAAGCTACTCATCGGTTGTGTGCATGGCACTTACAGAAGAATGTAACCTCAAATGGAGGCGAGCAGATGTTTCGTGAGATATTCTGTAAATGGCTTTATGCTGACATGGAGGTAGATGACTTCGAGCTTGAATGGGAAGAAGCTTCTGAGAAATTTGGTCTACACAAAAAATGTTGGGCAAACCAGATGTACGAAAAAAGGCACATGTGGTGTAATGCGTACCTTCGTGGCAAGTTTTGTGCTGGATATCGCACAACGTCTAGGTGTGAGGGAATAAATTCTCACATAAAGGGATTTTTGAACTCAAAACATAGTATTTTGGAATTGGTGCAAAATTTGGAGTTAGTAGTCCGAGAATACCGCAACAACGAGCTAGTTGCGCAATTCAATTCAATATATAGCACCCCTGTTCTAACAACGTGTCTGGATCCTATTGAGAGGTGCGCTGCAGATGTTTACACGAGAGCTATTTTTGTACTAGTTAAGAAAGAGATTGACGGTGTTGGAGCGATTAATTTTGTGAGTAAAAGGAGGGTCTCCACAACAATGGTATACACAATGGAAGAGTATGGTCATCCCGGCCACAACATTGTTACCTTATTTGATAGGACCATGACTAGAATGGAATGTCAGTGCCGATTCTGGGAGAAGGAGGGCTTTCCATGCAGACACATATTCTTTGTCATGAAGCACGAGCATTTAAAGGATATTCCAAATCGTTTAATTTTGAAGCGGTGGAGGAGGGACGCCAAGGCAATTGAAGAGTACGGCGATAAGACCGACGACATGTTGAGCGAGAGAGGTTTTCTATTGCGGCATGGGGCACTCCATGCGGCATCACAGTGGATGTTATACCTTGGTTCAAAGAATCGAACTGTATTTAAGACTGCAATGGAGGGAATTCGCGGAATTTGTACTGACATCCATGCAATACTTGGTCAACCGAATGAGGGAAGAAAAGCAAATGCGGACGAGCACATTCGGGATCCCGTTGTTGTTAGAACTAAAGGTGCTCCACGGTCCAAAGGCAAAAAGGGAAAGAAGAGGAGATGTACGTTTTGCAAAAGGACCGGCCACACAAAGCGGACATGTCTTGATAGGGTACCAAACCGATCCAAATGGGGTTTGCAAGAGGATGAAGAATCTGTCGAAATACCAGGGGCCAACGAGAACTTTATGGGGGTACATGAAACAAGTCTGCCTCCGAGGTCAGCATCGGTGTATTCACGAGATGGAAAAAATGTTTTGGCAGAATTAAAACCCGTGGGAACTCAGGAGAGGATCGTCGGAACTGCACAAAGTGAGATTCTAGCATCTGTTGCAGATGTAGGCAGTTGCGACTATCACCAACAGGTACTAGATCTCCTGAAATCGCTGAATGCAACAATAGGCTCAGATGGCATTGAGAAGTCCCAGTGA 2475 0.4424 MEGSQREEGCRPDEELDDACGGDSMNGVSDEYPSDYAYVFGLSEQDIIRKVFRSEERAYDFYSKFGRCHGFGVRKGDYGKDEEGNLIRRRFFCNRAGLRDEKHLNRLDRKRGHRPETMTNCLAKLSIYLDRENSTWKVRKVILDHNHELTPRRMVHMIPKFRRISDAAKANIDGMRGYGVSTSKILGYMAGVAGGYSLLGFTKKDAYNYIDHMRRAKVVNGDSNAAIVYLEGKAAADPMSMARYNVTKDGMLANMFWADGPCRVDYQYFGDVVAFDSTYKKNKYQRPLVIFSGSNNHKQTTIFGFGLVLDETIESYTWMLENLLEVMCNKQPSVVVTDGDDAMIAAVKKVFPEATHRLCAWHLQKNVTSNGGEQMFREIFCKWLYADMEVDDFELEWEEASEKFGLHKKCWANQMYEKRHMWCNAYLRGKFCAGYRTTSRCEGINSHIKGFLNSKHSILELVQNLELVVREYRNNELVAQFNSIYSTPVLTTCLDPIERCAADVYTRAIFVLVKKEIDGVGAINFVSKRRVSTTMVYTMEEYGHPGHNIVTLFDRTMTRMECQCRFWEKEGFPCRHIFFVMKHEHLKDIPNRLILKRWRRDAKAIEEYGDKTDDMLSERGFLLRHGALHAASQWMLYLGSKNRTVFKTAMEGIRGICTDIHAILGQPNEGRKANADEHIRDPVVVRTKGAPRSKGKKGKKRRCTFCKRTGHTKRTCLDRVPNRSKWGLQEDEESVEIPGANENFMGVHETSLPPRSASVYSRDGKNVLAELKPVGTQERIVGTAQSEILASVADVGSCDYHQQVLDLLKSLNATIGSDGIEKSQ 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00612 824 Pfam SWIM zinc finger 562 579 IPR007527 GO:0008270
Arst9g00612 824 SMART 26again6 560 587 IPR006564 GO:0008270
Arst9g00612 824 Pfam FAR1 DNA-binding domain 60 150 IPR004330 -
Arst9g00612 824 MobiDBLite consensus disorder prediction 1 18 - -
Arst9g00612 824 SUPERFAMILY Retrovirus zinc finger-like domains 689 724 IPR036875 GO:0003676|GO:0008270
Arst9g00612 824 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 623 IPR031052 GO:0006355
Arst9g00612 824 ProSiteProfiles Zinc finger SWIM-type profile. 547 585 IPR007527 GO:0008270
Arst9g00612 824 Pfam MULE transposase domain 272 366 IPR018289 -
Arst9g00612 824 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00612 Arst-Chr9 5243973 5247140 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst9g00612 MULE 6.9e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00612 - - ahf:112758792 928.317