Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00526 ATGGTCTATAAGAACCCTAATTCTGTGTTGCAGTCGAAGAAGGAAAAGATGACGACTGTTCCAGGGCAATTGGTGTGGGAGATCGTGAAGAAGAACAACTGCTTCTTGGTGAAAGAGTTTGGAAGGGGCACTCAGAGTGTTGAATTCAGCAGAGAGCCTAACAATCTCTACAATCTCAACTCCTTTAAATACTCAGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGTAAGGATCAGGGTGTGTTGTTGGCTACAACCAAGACCAAGAAGCAGAACAAGCCTTCTGCTCTTCTTCACAAGTCTCTGATGAAGAAGGAGTTCAGTAGGATGGCTAAGGCTGTTCAAAATCAGGTGTCAAAAAACCACTACAGGCCTGATCTCACTAATGCAGCTCTTGCAAGGTTGAGTGCCGTCAATAGAAGCATCAGAGTTGCCAAGTCTGGTGTCAAGAAGAGGAACAGACAGGGCTTGAAGATCCGTGGCAGGAAGTGGAAGTGA 507 0.4556 MVYKNPNSVLQSKKEKMTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREPNNLYNLNSFKYSGLANKKTVTIQPAGKDQGVLLATTKTKKQNKPSALLHKSLMKKEFSRMAKAVQNQVSKNHYRPDLTNAALARLSAVNRSIRVAKSGVKKRNRQGLKIRGRKWK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00526 168 Gene3D - 22 149 - -
Arst9g00526 168 FunFam 60S ribosomal protein L28 21 149 - -
Arst9g00526 168 Pfam Ribosomal L28e protein family 24 144 IPR029004 -
Arst9g00526 168 PANTHER 60S RIBOSOMAL PROTEIN L28 17 166 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00526 Arst-Chr9 4454149 4457020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00526 17 159 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 71.329 3.82e-74 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00526 K02903 - gmx:100499963 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00526 9 4454149 4457020 Arst7g02214 7 51485765 51487244 ECH
Arst9g00526 9 4454149 4457020 Arst9g00526 9 4454149 4457020 ECH
Arst7g02214 7 51485765 51487244 Arst9g00526 9 4454149 4457020 PCT