Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00498 ATGGATGGTCTCAATTGGGATGATGCAACTTCACAAATTGCAAGAAATAACACACCAATCTTATGGAGCAAACAACAACAAAGCCAAGAAATAATTCTTACATACCCAAATTCAGAACATTTGATTAATTATCAGCAGCAAGATGCAGCAACAATAGTGAAATCTTCAGCCATAATGTCACTATCAGAAAATGGACCTTACAACATGGATAATTATTACCAGATAAGTGGTAAGTACATGACAGATTTCAACATGGCCCAACAGCAACATGATCATCATCATCATTGTTTGATTTCATCAGCTACAAATAGCAACACTAATGATGATGATAATGATGGGATTTCAAAGATCTTGTTATCTGATGATGATTGCAAAAACTACTTGTGGAACTTGAGTAGTTCCACTACTGATGCTGCTTCCTCTGCTGAATCTGAAAGCAACAACAATAATAATGATGCTTCTACTATGCTTCCATGCTCTCATCAAAACTCCTCAGATCATCAACAATACATCAACCAAGAAGGACAATTCAATCCTATTATTATCACTAATAAGGATCAATCACCAATTATCAAGATAGAGAATCCACCAAGATCCAAGAAACCCAGATGGGAAAAGACTCCATTTTCATCAACAATAAGTTTCCAAATCCCAAATGAAGCATCAGCAACAATGTCATCAACTTCAACCACTGAAGAAGAAGCTGATCCAGAGGCCATAGCACAAATGAAGGAAATGATATACAGAGCAGCAGCATTCAGGCCGGTGAACTTGTTAGACTCAGATGAAGTGATTGAGAAGCCAAAGAGGAAGAATGTGAGAGTTTCAAGTGATCCACAAACTGTGGCTGCAAGGCAAAGAAGAGAGAAAATAAGCCAAAAAATCAGGGTTTTGCAGAAGATTGTTCCTGGTGGAACCAAAATGGACACTGCATCAATGCTTGATGAAGCTGCAAATTATCTTAAGTTTTTAAGGTCACAGGTTAAGGCACTTGAAAATTTAGGGAACAACACTACTAAAGTTGAAGCAATGGATTATAATAATTATAATAGTTTTGTATTCTCTTTCAACCCTTCCTTCCATTCTCAAATTCATTTTTGA 1101 0.3651 MDGLNWDDATSQIARNNTPILWSKQQQSQEIILTYPNSEHLINYQQQDAATIVKSSAIMSLSENGPYNMDNYYQISGKYMTDFNMAQQQHDHHHHCLISSATNSNTNDDDNDGISKILLSDDDCKNYLWNLSSSTTDAASSAESESNNNNNDASTMLPCSHQNSSDHQQYINQEGQFNPIIITNKDQSPIIKIENPPRSKKPRWEKTPFSSTISFQIPNEASATMSSTSTTEEEADPEAIAQMKEMIYRAAAFRPVNLLDSDEVIEKPKRKNVRVSSDPQTVAARQRREKISQKIRVLQKIVPGGTKMDTASMLDEAANYLKFLRSQVKALENLGNNTTKVEAMDYNNYNSFVFSFNPSFHSQIHF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00498 366 CDD bHLH_AtIND_like 276 334 - -
Arst9g00498 366 Coils Coil 314 334 - -
Arst9g00498 366 Gene3D - 280 345 IPR036638 GO:0046983
Arst9g00498 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
Arst9g00498 366 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 82 358 IPR045843 GO:0003700|GO:0006355
Arst9g00498 366 Pfam Helix-loop-helix DNA-binding domain 285 324 IPR011598 GO:0046983
Arst9g00498 366 SMART finulus 281 330 IPR011598 GO:0046983
Arst9g00498 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 280 333 IPR036638 GO:0046983
Arst9g00498 366 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00498 Arst-Chr9 4214669 4217028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00498 75 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 43.827 2.84e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g00498 HLH 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00498 - - aip:107616571 644.81