Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00493 ATGGTGAGGAGAATTTCACCACGTTCACATATTGTATTGCTTCTTCTTCTTATTATTGTGGCTCTAGTTCAAGCTCAAGATCAATCAGGATTCATTAGCATAGATTGTGGTCTACCTCAAAATTCCAGCTACACTGAGAAGCACACAAGCATATTCTACATTTCTGATTCTGGATTCATTGACACTGGTGTAAGCAAGAGTGTATCAGCTGAATTCAAGATCAATCTTCAACAACAACTAAGCAATTTGAGAAGCTTTCCAAGTGGAATAAGAAACTGTTACAGAATAAATGTGACAAGTGCTACAAAATACTTAATCAGAGCTAGTTTCTATTATGGAAACTATGATGGGACAAATGTAGCACCAAAATTTGATCTTCATCTTGGTGCTAATTTCATGGACACAGTGAAATTCACCAATGCATCAGTTACCACATTCAGTGAGATCATTTACACTCCATTATTGGACTATATTCATCTTTGTCTAGTTAACACAGGCACAGGGACACCATTCATTTCTGCTATAGAATTGAGGACTTTGAAGAATGATACTTATGTGACTCAATCATGGGAATCGTTGGCACGCCTCCGGCGATTCGACTTAGGTTCCACCACCAACTTACAATACAGGTACAAGGATGATATTTATGACAGAATTTGGGCACCACTAGGCTTTGATCTATGGACACAAATAAGCAGCAAACTCACCAATGATGAACTAACTCAGAATCATTACCAACCACCAACAATTGTAATGAGCACAGCCGCCATGCCAGTAAACGCTAGCGCTTCTTTCGATTTCTACTGGGATCCTGATAATGTGGATGAGCAATACTATGTGTTCATGCATTTTAATGAAGTTAAGAAGCTAGCACCAAATGAAACAAGATCATTCAATGTAACACTTAATGGAAAGTATTGGGGTGGACCTCTTGTACCTACATACCAATCAACATCCACCATTTTTAGTCCTTCAGCTTTGGCAGGAGAGTCTAGGTACTTGTTTTCGCTTCTCCGGACTGAGGATTCGACGCTTCCTCCAATCATCAATGCCATTGAGGTTTATACAGTGAAAGATTTCTCAAGACCAGAAACTTCACAAGATGATGTTGATGCTATCACAAACATCAAGAAAGCTTATGGGGTGGCTAGAAATTGGGAAGCTGATCCATGTGGCCCCACAAAATACATTTGGCAAGGTCTAAATTGTAGTTATGATGGCAATGATCCCCCAAGAATCACATCCTTGGACTTGTCTTCCAGTGGATTGAAAGGACAGATATCATCTTACATCTCCAAGCTCAGTATGTTACAATACTTGGATTTATCAAACAATAACTTAAGTGGATCAGTACCTGATTTCCTGACACAACTTCAGTCATTGAAAGTATTAAACTTGGGAAACAACAATCTCACAGGCTTAGTTCCCAATGGACTCCTTGATAAATCAAAGAAAGGTTCACTATCATTGAGTGTGGAACACAATCCAAATCTATGTGCATCAACTTCATGCAACCAACAAACAGGTGGTGCAATAAGCAACAAGAAGAAGAAGAACAACAACAATCACATAGTTATTCCCATTGCAGCATCAATTGCTGGGGTTTTGGTGCTTCTAGCAATTGTAGCAACAGCTGTTATCTGTGGACTTAAAAAGAGAAAGTCAAAAGCTGTGAACATTGATGAAGAACAAACTGCTCCAAATTTTTCAAAAATTGGACCCAACCAAAGACAATATACATTCAATGAAATTGTTAAGATCACCAACAACTTCAATAGAATTCTTGGTAGAGGTGGATTTGGTACAGTTTACCATGGACTAATTGGTGATACTCAAGTAGCTGTCAAGATGCTTTCACCATCGGCAGTGCGAGGATATGAACAATTTCTAGCAGAGGTTAAACTTCTGATGGTAGTACACCACAGAAATCTCACTTCTCTTATTGGTTATTGCAATGATGAAAGCAATATAGGACTCATCTATGAATACATGGCGAATGGAAACTTAGAAGAACATCTTTCAGGAAAAAAGAACAATGCAAAGTTGTTGTCATGGGAAGATAGACTCCGAATATCAGTGGATGCAGCACAAGGATTGGAATATCTGCATAGTGGTTGCAAGCCACCTATAATCCACAGAGATGTGAAATGTGCAAACATTTTATTAAATGAAAACTTTGAAGCAAAATTGGCTGATTTTGGATTATCCAAACCTTTTCCCACTGAAGAAGGCACACACATTTCAACTGTTGTTGCTGGAACTCCTGGTTATTTAGATCCTGAGTATCGCGATTCAAACAAGTTGGCAGAGAAGAGTGATGTTTACAGCTTTGGAGTAGTTCTTTTGAAGATGATCACAGGTCAAGCAGCCTATGTGAAAATGCAGGACGAGGACAACAAGCCTCACATAAGTTCTTGGATTAGTTCCATGCTTTCCAATGGAGAGATAAAGAGCATTGTTGACTCAAAGTTACAAGAAGATTTTGACAGCGGCTCTGTGTGGAAAGCTGTTGAAACAGCAATGGCTTGTGTGGCATCTAGTTCTAACAAGAGGCCTCACATGAGTGATGTTGTGACTCAGCTAAAGGAGTGTTTGGCTGCAGAATTAGCACGCAAAAGAACTGATCATGCCACTGAACAAAGTGATTCACTTGAGAGTGACTTGGCTTCCATAAGTGTCACTACAACTGAATTTGAACCCATAGCTAGGTAG 2712 0.3923 MVRRISPRSHIVLLLLLIIVALVQAQDQSGFISIDCGLPQNSSYTEKHTSIFYISDSGFIDTGVSKSVSAEFKINLQQQLSNLRSFPSGIRNCYRINVTSATKYLIRASFYYGNYDGTNVAPKFDLHLGANFMDTVKFTNASVTTFSEIIYTPLLDYIHLCLVNTGTGTPFISAIELRTLKNDTYVTQSWESLARLRRFDLGSTTNLQYRYKDDIYDRIWAPLGFDLWTQISSKLTNDELTQNHYQPPTIVMSTAAMPVNASASFDFYWDPDNVDEQYYVFMHFNEVKKLAPNETRSFNVTLNGKYWGGPLVPTYQSTSTIFSPSALAGESRYLFSLLRTEDSTLPPIINAIEVYTVKDFSRPETSQDDVDAITNIKKAYGVARNWEADPCGPTKYIWQGLNCSYDGNDPPRITSLDLSSSGLKGQISSYISKLSMLQYLDLSNNNLSGSVPDFLTQLQSLKVLNLGNNNLTGLVPNGLLDKSKKGSLSLSVEHNPNLCASTSCNQQTGGAISNKKKKNNNNHIVIPIAASIAGVLVLLAIVATAVICGLKKRKSKAVNIDEEQTAPNFSKIGPNQRQYTFNEIVKITNNFNRILGRGGFGTVYHGLIGDTQVAVKMLSPSAVRGYEQFLAEVKLLMVVHHRNLTSLIGYCNDESNIGLIYEYMANGNLEEHLSGKKNNAKLLSWEDRLRISVDAAQGLEYLHSGCKPPIIHRDVKCANILLNENFEAKLADFGLSKPFPTEEGTHISTVVAGTPGYLDPEYRDSNKLAEKSDVYSFGVVLLKMITGQAAYVKMQDEDNKPHISSWISSMLSNGEIKSIVDSKLQEDFDSGSVWKAVETAMACVASSSNKRPHMSDVVTQLKECLAAELARKRTDHATEQSDSLESDLASISVTTTEFEPIAR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00493 903 Gene3D Ribonuclease Inhibitor 370 497 IPR032675 -
Arst9g00493 903 CDD STKc_IRAK 595 863 - -
Arst9g00493 903 SUPERFAMILY Protein kinase-like (PK-like) 572 861 IPR011009 -
Arst9g00493 903 ProSiteProfiles Leucine-rich repeat profile. 436 458 IPR001611 GO:0005515
Arst9g00493 903 SMART serkin_6 589 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00493 903 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 664 874 - -
Arst9g00493 903 ProSitePatterns Protein kinases ATP-binding region signature. 595 616 IPR017441 GO:0005524
Arst9g00493 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Arst9g00493 903 SUPERFAMILY L domain-like 396 490 - -
Arst9g00493 903 PANTHER OS07G0107800 PROTEIN-RELATED 32 865 - -
Arst9g00493 903 Gene3D Phosphorylase Kinase; domain 1 576 663 - -
Arst9g00493 903 ProSiteProfiles Leucine-rich repeat profile. 460 481 IPR001611 GO:0005515
Arst9g00493 903 ProSiteProfiles Protein kinase domain profile. 589 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00493 903 Pfam Protein tyrosine and serine/threonine kinase 591 861 IPR001245 GO:0004672|GO:0006468
Arst9g00493 903 PRINTS Leucine-rich repeat signature 458 471 - -
Arst9g00493 903 PRINTS Leucine-rich repeat signature 437 450 - -
Arst9g00493 903 SMART LRR_typ_2 458 481 IPR003591 -
Arst9g00493 903 SMART LRR_typ_2 434 457 IPR003591 -
Arst9g00493 903 Pfam Malectin-like domain 34 357 IPR024788 -
Arst9g00493 903 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515
Arst9g00493 903 FunFam Leucine-rich repeat receptor-like kinase 368 501 - -
Arst9g00493 903 Gene3D Transferase(Phosphotransferase) domain 1 664 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00493 Arst-Chr9 4195989 4201105 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00493 11 903 Receptor kinase-like Gene Family AT1G51800 48.953 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst9g00493 Malectin_like 1.6e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00493 - - gmx:100779474 1187.17