Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g00489 | ATGGCTGCGACACGCATAGCTTCCTCCTTATTTTCTTCTTCAATCAACACTACTGTCAAAAATTGCTTCGCTTCAAAAACCATAATAGACCCTCCTCTCATAGCAATATCCTCCAATCGCAAGTTATCATCACTGACCCAGTGCTATTATTTTGTGGAACCTTTGTCATTAATTGGTGTTACTAAGTTATGGACGCCTAAAACTTCAGCAGCTGTTGTTGTTTCACAAGAAGAAATTGCTTTGTCTGATGATGCGGGCTTAGTTGAAGAGGAAAAAGAAAGGCAAGTATTGGAAGAACAGCAACAAGATGATTCTACTGAGTCCTCTATCAACACTAAGCTTTACTTTGGAAATTTGCCGTACAGTGTTGACTTAAATCTTTTGTTTGATGTGATGCATTCCAGAAATTCCATAATGTTAATAATCTTATATATATATTTACAGGTTCTCTATGACAGGGACACTGGAAAAAGCAGAGGCTTTGCATTTGTGACAATGAGTTGCATTGAAGATTGCAATGCAGTAATACAAAATCTTGACGGAAAAGAATTCTTGGGCCGAACTTTACGGGTAAACTTCGCTGACAAGCCAAAACCAAAAGAACCATTGTACCCTGAAACTGAGCATAAGCTATTTGTTGGAAATCTGTCATGGTCAGTAACTTCTGAGAGCCTTACAGAAGCGTTTCAAGAATATGGAACTGTGGTTGGAGCTAGGGTCTTGTATGATGGCGAAACAGGAAGGTCACGCGGCTATGGCTTCGTTTGCTATTCGACAAAGGCAGAAATGGAAGCTGCCCTTACATCTCTGAATGATGTGGAACTAGAGGGACGGGCAATGCGTGTAAGTGTGGCGCAAGGTAAGCGTTCGCAAGGTTAA | 879 | 0.4073 | MAATRIASSLFSSSINTTVKNCFASKTIIDPPLIAISSNRKLSSLTQCYYFVEPLSLIGVTKLWTPKTSAAVVVSQEEIALSDDAGLVEEEKERQVLEEQQQDDSTESSINTKLYFGNLPYSVDLNLLFDVMHSRNSIMLIILYIYLQVLYDRDTGKSRGFAFVTMSCIEDCNAVIQNLDGKEFLGRTLRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALTSLNDVELEGRAMRVSVAQGKRSQG | 292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g00489 | 292 | Coils | Coil | 87 | 107 | - | - | |
Arst9g00489 | 292 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 114 | 190 | IPR000504 | GO:0003723 | |
Arst9g00489 | 292 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 211 | 280 | IPR000504 | GO:0003723 | |
Arst9g00489 | 292 | FunFam | 28 kDa ribonucleoprotein, chloroplastic | 200 | 291 | - | - | |
Arst9g00489 | 292 | Gene3D | - | 80 | 199 | IPR012677 | - | |
Arst9g00489 | 292 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 209 | 287 | IPR000504 | GO:0003723 | |
Arst9g00489 | 292 | SMART | rrm1_1 | 113 | 192 | IPR000504 | GO:0003723 | |
Arst9g00489 | 292 | SMART | rrm1_1 | 210 | 283 | IPR000504 | GO:0003723 | |
Arst9g00489 | 292 | SUPERFAMILY | RNA-binding domain, RBD | 111 | 289 | IPR035979 | GO:0003676 | |
Arst9g00489 | 292 | CDD | RRM2_NsCP33_like | 210 | 285 | - | - | |
Arst9g00489 | 292 | Gene3D | - | 200 | 292 | IPR012677 | - | |
Arst9g00489 | 292 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 112 | 196 | IPR000504 | GO:0003723 | |
Arst9g00489 | 292 | PANTHER | OS02G0815200 PROTEIN | 75 | 289 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g00489 | Arst-Chr9 | 4155754 | 4158000 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst9g00489 | 112 | 288 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 29.474 | 8.07e-16 | 75.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g00489 | - | - | adu:107464158 | 558.525 |