Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00485 ATGCATGCAATGGCAAAGAAGATCGCGAATTCTCTTTTTCTACTACTTGCAGCTCTTTCTTTCGTAGCCACGGTCCAAGGCCAGGATCAATCAGCAGTGGATGCAGTCACAAACATCAAGAGGACTTATAAAGTGTACAGTAGAAACTGGCAAGGAGATCCATGTGCCCCCATTGCATACAAGTGGCAAGGTGTAGACTGTACCTCTTTTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGACCGGACATATAGCAGCTGATATATCCAAGCTTACCATGTTAGAGTCCTTAGATTTATCAGACAATGAGTTAAGTGGGACTGTTCCTTCTTTTCTGGCACAACTGCAATCACTGGAATACTTGAATTTAGCAAACAACAACCTAACAGGTTCAGTTTCAAACGAACTCCTTCAAAAACAAAGTGATGGTCTATTATCTTTGAGTGTGGGGCGAAATCCAAATCTATGTGCATCAACTGCATGCATCTCGCAATCAAATGATACAAGAAAGAAAGACAATAATGTAGTTATTGCAGTGGTAGCACCAATTGCAGGGATCTTACTGCTTCTAGTGATTATAGCAGCAGTTATAATTTTTCGCCGGAGAAAGCGATATGCTGCTGCTACGAACATTATTCTTGGGAAGCCTCGTAGTTCAATTAAGGGGTCAGAATTGGAATCGAAGCAACGACAATATTCATTTAATGAGGTTGTTGAGATGACCAACAATTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAGGACATTCAAGTGGCTGTCAAGATGCTTTCTCTATCTTCAGTGCATGGATATCAACAATTTGTTGCAGAGGTTAAGCTTCTAATGAGAGTACATCATCGAAATCTGACTTCTCTTATTGGCTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATGGAAATTTAGATGAACATCTTTCAGGAAAAAACAACAGGGAAACGTCCTTGAATTGGGAAGATAGACTTCGAATAGCATTAGATGCCGCCCAAGCATTGGAATATCTGCACAATGGTTGTAAGCCACCCATAATCCACAGAGATGTAAAATGCACAAATATTCTATTAAATGAAAACTTTCATGGCAAATTGGCTGATTTTGGATTGTCCAAATGTTTCGCGACTGACGGGGATACACATGTATCGACAATTGTAGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAACAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTCTTAAGGATAATCACAGGTCAAGCGGTGATAATGGTAAGGGAAGACATGATTCATCATATAAGTCAGCAGGTGAACTCCATGGTTGCTGAAGGGGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGATAATAACTCTGCATGGAACGCGGTTGAAATAGCAATGGCCTCTGTGTCTACCATTTCGATGGAAAGGCCATACATGAGTGATATAGTGAAAGAGCTAAAGGACTGTTTGGCTGCAGAGTTAGCTCGAAAACATAATAGTTGTGACCTTCAAAATAAAGATTTAGTTGAGCAGGTTAGTCTGAACTTGATTAGTACTGATATCACTCCCATAGCTAGGTAG 1677 0.3989 MHAMAKKIANSLFLLLAALSFVATVQGQDQSAVDAVTNIKRTYKVYSRNWQGDPCAPIAYKWQGVDCTSFDGFLRITSLNLSSSGLTGHIAADISKLTMLESLDLSDNELSGTVPSFLAQLQSLEYLNLANNNLTGSVSNELLQKQSDGLLSLSVGRNPNLCASTACISQSNDTRKKDNNVVIAVVAPIAGILLLLVIIAAVIIFRRRKRYAAATNIILGKPRSSIKGSELESKQRQYSFNEVVEMTNNFDRILGRGGFGTVYHGFIEDIQVAVKMLSLSSVHGYQQFVAEVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSGKNNRETSLNWEDRLRIALDAAQALEYLHNGCKPPIIHRDVKCTNILLNENFHGKLADFGLSKCFATDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVIMVREDMIHHISQQVNSMVAEGDITKVVDSRLQGDFDNNSAWNAVEIAMASVSTISMERPYMSDIVKELKDCLAAELARKHNSCDLQNKDLVEQVSLNLISTDITPIAR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00485 558 Pfam Protein tyrosine and serine/threonine kinase 250 516 IPR001245 GO:0004672|GO:0006468
Arst9g00485 558 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Arst9g00485 558 Gene3D Phosphorylase Kinase; domain 1 235 322 - -
Arst9g00485 558 PRINTS Leucine-rich repeat signature 100 113 - -
Arst9g00485 558 PRINTS Leucine-rich repeat signature 121 134 - -
Arst9g00485 558 SUPERFAMILY Protein kinase-like (PK-like) 229 518 IPR011009 -
Arst9g00485 558 ProSiteProfiles Protein kinase domain profile. 248 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00485 558 Gene3D Transferase(Phosphotransferase) domain 1 323 545 - -
Arst9g00485 558 Gene3D Ribonuclease Inhibitor 32 151 IPR032675 -
Arst9g00485 558 SUPERFAMILY L domain-like 59 160 - -
Arst9g00485 558 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 323 531 - -
Arst9g00485 558 ProSitePatterns Protein kinases ATP-binding region signature. 254 275 IPR017441 GO:0005524
Arst9g00485 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Arst9g00485 558 PANTHER OS07G0107800 PROTEIN-RELATED 25 522 - -
Arst9g00485 558 FunFam Leucine-rich repeat receptor-like kinase 31 164 - -
Arst9g00485 558 SMART serkin_6 248 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00485 558 FunFam Leucine-rich repeat receptor-like protein kinase 226 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00485 Arst-Chr9 4096414 4103123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00485 33 558 Receptor kinase-like Gene Family AT1G51850 50.277 5.86e-178 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst9g00485 PK_Tyr_Ser-Thr 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00485 - - adu:107464157 988.793