Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00483 ATGACCAATAATTTTCATAGGATTCTTGGCAGAGGTGGATTTGGAACAGTTTACCATGGCTTTATTGAGGACATTCAGGTGGCTGTTAAGCTTCTAATGAGAATGCATCATCGAAATCTGACTTATCTTATTGGTTACTGCAATGAAGAAACTAATATAGGACTCATCTATGAATACATGGCAAATGGAAACTTAGACGAACATCTTTCGAGAAAAAACAATAGGGAAAAGTCCTTGAATTGGGAAGATAGACTTCGAATAGCATTGGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCCATAGTCCACAGAGATGTAAAATGCACAAATATTCTATTAGACGAAAACTTGCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCTGCTGACGGCGATACACATGTGTCAACAATCGTGGCCGGAACTCCAGGCTACCTAGATCCTGAATATTCTACATCAAACAGGTTGACAGAAAAAAGTGATGTATATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAATCGGTTATAATAGTAAGGGAAGACACAGCTTATCATATAAGTCAGCGGGTTAACTCTATGCTTGCTGAAGGGGATATAACAAAAGTTGTTGATTCAAGGATACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTGTCACTTCGGTGGAAAGACCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACATATTTGTGACCTTCAAAATGAAGATTTAGTTCAACAGTTTAGTGTGAATTTAATTAGTACTGATATGACTCCACTAGCTAGATAG 885 0.3864 MTNNFHRILGRGGFGTVYHGFIEDIQVAVKLLMRMHHRNLTYLIGYCNEETNIGLIYEYMANGNLDEHLSRKNNREKSLNWEDRLRIALDAAQGLEYLHNGCKPPIVHRDVKCTNILLDENLHAKLADFGLSKCFAADGDTHVSTIVAGTPGYLDPEYSTSNRLTEKSDVYSFGVVLLRIITGQSVIIVREDTAYHISQRVNSMLAEGDITKVVDSRIQGDFDSNSAWRAVEIAMASVSVTSVERPYMRDIVTQLKDCLAAELARKHICDLQNEDLVQQFSVNLISTDMTPLAR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00483 294 Gene3D Transferase(Phosphotransferase) domain 1 61 279 - -
Arst9g00483 294 SUPERFAMILY Protein kinase-like (PK-like) 5 255 IPR011009 -
Arst9g00483 294 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 60 268 - -
Arst9g00483 294 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00483 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Arst9g00483 294 Gene3D Phosphorylase Kinase; domain 1 31 60 - -
Arst9g00483 294 ProSiteProfiles Protein kinase domain profile. 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00483 294 Pfam Protein tyrosine and serine/threonine kinase 28 255 IPR001245 GO:0004672|GO:0006468
Arst9g00483 294 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Arst9g00483 294 PANTHER OS07G0107800 PROTEIN-RELATED 1 259 - -
Arst9g00483 294 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00483 Arst-Chr9 4063996 4065368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00483 1 267 Receptor kinase-like Gene Family AT1G51880 57.692 4.12e-110 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst9g00483 PK_Tyr_Ser-Thr 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00483 - - aip:107614771 544.658