Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00480 ATGGCGAAGATTATCACAAATTCCCTTTTTCTACTGCTTGGAGCTCTTTCTTTCGTAGCAACGATCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGACTGTGGATTACCTGGAAATTCTAACTACACTGAAAAGAATACAGGAATCAATTACATTTCAGATGCTAAGTTTATTGATTCTGGTGTGAGTAAGACTGTGTCGCCCCAAGATAAGACTACTCATCCACAATACTTTACTTATCTTCGGAGCTTTCCTTATGGAACAAGAAACTGTTACAGAATAAATGTAACTAGTGCTACTAGATATTTAATGAGAGCTAGTTTCCTGTACGGAAACTATGACGGTCTTAAAAAGCTCCCAGAATTTGATCTTTATCTTGGAGTTCATTTTTGGGACACGGTGAAATTTACAGATTCATCAGTCAGCATAAATTATGAAATTATACACACTCTATCGACGGATTATATCCATATCTGTATGGTTAACAAAGGCACAGGGACCCCATTCATTTCAGTTATAGAAATGAGGATTTTGGACAATGCCAACTCTACTTATGTCACTGAAGACCGATCTACATCATTGGCACGATTCCGAAGGTTGGCTTTTGGTATCACCAACTTAACATACAGGTATAAAGATGATCCATATGACCGGATATGGGAGCCTTATTGGGACCAAAAGTGGACACAATTAAGCAGTAGACTTAGCAACGATGAATTGGGTCAGAATGCCTTTAAAGTACCAGATGTTGTATTGGAGACTTCGGCTACACCAAAAAATGCTACTGCCTCATTAGACTTGTACTGGGAGGAAGATTATCATAACAATGAAACTCAGCACCAATACTATTTCTACTTACACTTCGCTGACCTTCGGAAGCTGGCTCCAAATCAAACAAGTTCAACCAATATCACCATAAATGGCGTGTTTTGGGCAACAGTGGAACTCTCATACGCTAATGCGGATTCCACTTATTCTAAAGTCCCTTGGTATGGAAGCAAAAAGTATCACATTTCCCTTTTTCGGACAGAATCTTCCTCCCTTCCACCCATCATCAATGCTCTTGAGATTTATTCAGTGAAAGATTTCTCATCACAGTTAGAAACCCTAAAAGATGACGTGGATGCAGTCACAAACATCAAGAGGGCTTATAGGGTGAACAGGAGAAACTGGCAAGGAGATCCATGTGTCCCCAATAGATACAAGTGGCAAGGCGTAGACTGTAGCTCTTTTGATGGCTTTCAAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGACCGGAGATATACCTGCTGATATTTCCAAGCTTACCATGTTAAAATCCTTAGATTTATCAAACAATGACTTAAGTGGGACTATTCCGTCTTTTCTGGCACAACTGCAATCACTGGAATACTTAAACTTGGCTAACAACACCCTAACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCTATTATCCTTGAGTGTGGGGCAAAATCCAAATTTATGTGCATCAACTTCATGCAACCCGCAAACAAATGATACAAGAAAGAAAGAGAATAATGTAGTTATTGCAGTGGTAGCATCAATTGCAGGGATATTACTGCTTCTAGTGATTATAGCAGCAGTTATAATCTTTCACCAGAGAAAGCGATATGATGCTGCTAGGAACATTATTCTTGGGAAGCGTCGTAGTTCAATTAAGGGGTCAGAATTGGAATCGAAGCAACGACAATATTCATTTAATGAGGTTGTTAAGATGACCAACAACTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCACGGCTTTATCGATGACATTCAAGTGGCTGTCAAGATGCTTTCCCTATCTTCAGTGCATGGATATCAACAATTTGTTGCAGAGGTTAAGCTTCTAATGAGAGTACATCATCGAAATCTGACTTCTCTTATTGGCTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATGGAAATTTAGATGAACATCTTTCAGGAAAAGCCAACAGGGGAAGGTCCTTGAATTGGGAAGATAGACTTGGAATAGCATTAGATGCCGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTAAAATGCACAAATATTCTATTAAATGAAAACTTTCATGGCAAATTGGCTGATTTTGGATTGTCCAAATGTTTTGCGACTGACGGGGATACACATGTATCGACAATTGTAGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAACAGATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAAGCGGTGATAATGGTAAGGGAAGACATGATTCATCATATAAGCCAGCGGGTTAACTCCATGGTTGCTGAAGGGGATATAACAAAAATTGTTGATTCAAGGTTACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGTAGTTGAAATAGCAATGGCTTCTGTGTCTGCCATTTCGGTGGAAAGACCATACATGAGTGATATAGTGAAAGAACTAAAGGAGTGCTTGGCTGCAGAGTTAGCCCGAAAACATAATAGCTGTGAACTTCAAAATGAAGATTTAGGTTGGCAGGGCAGTCTCAACTTGATTAGTAGTGATATGACTCCCATAGCTAGGTAG 2703 0.3936 MAKIITNSLFLLLGALSFVATIQGQDQSGFISIDCGLPGNSNYTEKNTGINYISDAKFIDSGVSKTVSPQDKTTHPQYFTYLRSFPYGTRNCYRINVTSATRYLMRASFLYGNYDGLKKLPEFDLYLGVHFWDTVKFTDSSVSINYEIIHTLSTDYIHICMVNKGTGTPFISVIEMRILDNANSTYVTEDRSTSLARFRRLAFGITNLTYRYKDDPYDRIWEPYWDQKWTQLSSRLSNDELGQNAFKVPDVVLETSATPKNATASLDLYWEEDYHNNETQHQYYFYLHFADLRKLAPNQTSSTNITINGVFWATVELSYANADSTYSKVPWYGSKKYHISLFRTESSSLPPIINALEIYSVKDFSSQLETLKDDVDAVTNIKRAYRVNRRNWQGDPCVPNRYKWQGVDCSSFDGFQRITSLNLSSSGLTGDIPADISKLTMLKSLDLSNNDLSGTIPSFLAQLQSLEYLNLANNTLTGSVSNELLQKQSDGLLSLSVGQNPNLCASTSCNPQTNDTRKKENNVVIAVVASIAGILLLLVIIAAVIIFHQRKRYDAARNIILGKRRSSIKGSELESKQRQYSFNEVVKMTNNFDRILGRGGFGTVYHGFIDDIQVAVKMLSLSSVHGYQQFVAEVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSGKANRGRSLNWEDRLGIALDAAQGLEYLHNGCKPPIIHRDVKCTNILLNENFHGKLADFGLSKCFATDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVIMVREDMIHHISQRVNSMVAEGDITKIVDSRLQGDFDSNSAWRVVEIAMASVSAISVERPYMSDIVKELKECLAAELARKHNSCELQNEDLGWQGSLNLISSDMTPIAR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00480 900 SUPERFAMILY L domain-like 399 501 - -
Arst9g00480 900 ProSiteProfiles Protein kinase domain profile. 590 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00480 900 Gene3D Phosphorylase Kinase; domain 1 577 664 - -
Arst9g00480 900 Pfam Leucine Rich Repeat 442 460 IPR001611 GO:0005515
Arst9g00480 900 SMART serkin_6 590 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00480 900 Pfam Malectin-like domain 33 361 IPR024788 -
Arst9g00480 900 PRINTS Leucine-rich repeat signature 442 455 - -
Arst9g00480 900 PRINTS Leucine-rich repeat signature 463 476 - -
Arst9g00480 900 PANTHER OS07G0107800 PROTEIN-RELATED 31 864 - -
Arst9g00480 900 FunFam Leucine-rich repeat receptor-like kinase 373 506 - -
Arst9g00480 900 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 665 873 - -
Arst9g00480 900 FunFam Leucine-rich repeat receptor-like protein kinase 568 664 - -
Arst9g00480 900 Gene3D Ribonuclease Inhibitor 368 494 IPR032675 -
Arst9g00480 900 Pfam Protein tyrosine and serine/threonine kinase 592 859 IPR001245 GO:0004672|GO:0006468
Arst9g00480 900 SUPERFAMILY Protein kinase-like (PK-like) 571 860 IPR011009 -
Arst9g00480 900 Gene3D Transferase(Phosphotransferase) domain 1 665 882 - -
Arst9g00480 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Arst9g00480 900 ProSitePatterns Protein kinases ATP-binding region signature. 596 617 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00480 Arst-Chr9 4018075 4024801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00480 9 874 Receptor kinase-like Gene Family AT1G51800 47.045 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst9g00480 Malectin_like 2.3e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00480 - - adu:107464157 1519.98