Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00479 ATGGCAAAGATGATCGCAAATTCTGTTTTTCTATTGCTTGGAGCTCTTTCTTTCATAGCAACGGTCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGATTGTGGATTACCTGAAAATTCCAATTACACGGAGAAGAACACGGGAATCAATTACATTTCAGATGCTAATTTCATTGATTCTGGTGTGAGTAAAACTGTGTCATCCCAAGATAAGACTACTCATCCACAATATTTTAATTACCTTCGGAGTTTTCCTAATGGAATAAGAAATTGTTACAGAATAAACGTAACAAGTGTTACTAGATATTTAATCAGAGCTAGTTTTTTGTATGGAAACTATGATGGTCTTAATAAGCTTCCAGAGTTTGATCTTTATCTTGGAGTTCATTTCTGGGAGACGGTAAAATTCACAAATTCTTCAGTCAGCATAAACTATGAGATCATCCACACTCTGTCGCTGGATTATATCCATATCTGCTTGGTTAACAAAGGCACAGGGACACCATTCATTTCAGTTATAGAAATGAGGGTTTTGGGCAATCTCGACACTACTTATCGCACTATAGACTCATCTACACGATTGGCACGATTCCGAAGGTTGTATTTTAGTTCTATCACCAACTTAATATACAGGTATCAAGATGATCCCTATGACCGGATATGGGAGCCTTATTGGGAAAACAAGTGGAGACTAATAAGCAGCAACCATAGCAATGATGCCCTTGATCAGGATAACTTTAAACCACCGGCAGTTGTGTTGAAGACTGCAGCCACATCAATAAATGCTACTGCCTCATTAGATTTCCATTGGGACAATGATGACAATAAAACTCAGCACCAATACTATTTCTACCTACACTTCACGGAGCTTCAGCAGTTGGGTGCAGATCATACAAGATCATTCAATATCAACATGGATGGTGAGACTTGGAATACACTTGAATCACTCAAATACGGAAAAGTATACACCAAACATGTTAGAGGACTTTCCTCTGGATGCAAACAGTGTCGCATTTCACTTATCCGGACAGAATATTCTACCCTTCCACCCATTATCAGTGCTCTTGAGATTTATTTAGCAAAAAATTTCTCATCACAGTCAGGAACCGACAAAGACGACGCGGATGCAGTCACAAACATCAAGATGGCTTATAGGGTGGACAGTAGAAACTGGCAAGGAGATCCATGTCTTCCCGATGCATACAAATGGCAAGGTGTAGACTGTAGCACTATTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCACCGGACATATACCGACTGATATCTCCAAGCTTACTATGTTAAAGTCCTTAGATTTATCAGACAATGGTTTAAGTGGGAATATACCTAATTTTTTGGCGCAACTGCAATCACTAGAATACTTAAACTTGGCAAACAACAACCTTACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCGATTAACCTTGAGTGTGGGGCAAAATCCAAATCTTCTATGTGGAATAACTTCATGCACCCTGCAAACAACTGCTACAAGAAAGAAAAAGAATAATGCAGTAATTACAGTGGTAGCATCAATTGCAGGGATATTGCTGCTTCTAGGGATTGCAGCAGTTATAATCTTTCGCCGAAGAAAGACATATGATGCTGCTAACAACTTTGTGCTTGGGAGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAACTAAGCAACGAGAGTATTCATTTAATGAAGTGGTTAAGATGACCAACAATTTTGATAGGATTCTTGGCAGAGGTGGGTTCGGAACAGTTTACTATGGCTTTATTGAGGACATTGAAGTGGCTGTTAAGATGCTTTCATTATCATCAGTGCAAGGATATCAACAATTTATTGCAGAGGTTAAGCTTCTAATGAGGGTGCATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAACATAGGACTCATCTATGAATACATGAAAAATGGAGATTTAGATGAACATCTTTCAGGAAAAAACAATAGGGGAAAGTCTTTGAACTGGGAAGATAGACTTCGAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTGGCTGATTTTGGATTATCCAAATGTTTTGCGGCTGAAGGCGATACACATGTGTCAACCAATGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAATAGATTAACAGAAAAAAGTGATGTGTATAGTTTTGGAGTTGTTCTTTTAAGGATAATTACAGGTCAACCGGTGATAATAATAAAGGAAGACACAACTCATCATATAATTGAACGGGTTAATTCAATGATTGCTGAAGGGGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTGCCACTTCGGTGCAAAGGCCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACGTAATATTTGTGACCTTCAAAATGAAGATTTAGTTGAACAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 2703 0.3855 MAKMIANSVFLLLGALSFIATVQGQDQSGFISIDCGLPENSNYTEKNTGINYISDANFIDSGVSKTVSSQDKTTHPQYFNYLRSFPNGIRNCYRINVTSVTRYLIRASFLYGNYDGLNKLPEFDLYLGVHFWETVKFTNSSVSINYEIIHTLSLDYIHICLVNKGTGTPFISVIEMRVLGNLDTTYRTIDSSTRLARFRRLYFSSITNLIYRYQDDPYDRIWEPYWENKWRLISSNHSNDALDQDNFKPPAVVLKTAATSINATASLDFHWDNDDNKTQHQYYFYLHFTELQQLGADHTRSFNINMDGETWNTLESLKYGKVYTKHVRGLSSGCKQCRISLIRTEYSTLPPIISALEIYLAKNFSSQSGTDKDDADAVTNIKMAYRVDSRNWQGDPCLPDAYKWQGVDCSTIDGFLRITSLNLSSSGLTGHIPTDISKLTMLKSLDLSDNGLSGNIPNFLAQLQSLEYLNLANNNLTGSVSNELLQKQSDGRLTLSVGQNPNLLCGITSCTLQTTATRKKKNNAVITVVASIAGILLLLGIAAVIIFRRRKTYDAANNFVLGRRHNPIKESELETKQREYSFNEVVKMTNNFDRILGRGGFGTVYYGFIEDIEVAVKMLSLSSVQGYQQFIAEVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMKNGDLDEHLSGKNNRGKSLNWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAEGDTHVSTNVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIIKEDTTHHIIERVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSATSVQRPYMRDIVTQLKDCLAAELARKRNICDLQNEDLVEQFSVNLISTDMTPSAR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00479 900 Gene3D Ribonuclease Inhibitor 376 496 IPR032675 -
Arst9g00479 900 ProSiteProfiles Leucine-rich repeat profile. 465 487 IPR001611 GO:0005515
Arst9g00479 900 Pfam Malectin-like domain 33 359 IPR024788 -
Arst9g00479 900 SMART serkin_6 590 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00479 900 FunFam Leucine-rich repeat receptor-like protein kinase 568 664 - -
Arst9g00479 900 SUPERFAMILY Protein kinase-like (PK-like) 566 860 IPR011009 -
Arst9g00479 900 Pfam Protein tyrosine and serine/threonine kinase 592 859 IPR001245 GO:0004672|GO:0006468
Arst9g00479 900 Gene3D Transferase(Phosphotransferase) domain 1 665 884 - -
Arst9g00479 900 FunFam Leucine-rich repeat receptor-like kinase 374 505 - -
Arst9g00479 900 ProSiteProfiles Protein kinase domain profile. 590 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00479 900 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 665 873 - -
Arst9g00479 900 Gene3D Phosphorylase Kinase; domain 1 577 664 - -
Arst9g00479 900 PANTHER OS07G0107800 PROTEIN-RELATED 31 864 - -
Arst9g00479 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Arst9g00479 900 SUPERFAMILY L domain-like 399 486 - -
Arst9g00479 900 ProSitePatterns Protein kinases ATP-binding region signature. 596 617 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00479 Arst-Chr9 3998653 4005748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00479 4 900 Receptor kinase-like Gene Family AT1G51800 46.389 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst9g00479 Malectin_like 1.2e-101 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00479 - - adu:107464157 1394.79