Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00478 ATGGCTTCAAAACTTGAAGGTGGAGCTTACCTCTCTTCTTTTGTTGATGCTATTTCAAAGAAGCTATCTTCAATACTTGAAGATGACTCTGTTCTGGAAGGAAATGACTCTGTCCTGGAGTTGCTTGAAAGGTTGGATGAAATTCTGTGTGATGTTGAACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCCGTAACGATAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTACATGGCTGATGACTTTCTCGATGAACTCTCCACTAAAGCTGTCACTGCCACTCCAGGTAACTCTTCTTCCTGGTCTCGCCCTGTTGATTCAATTATTGAAGACAGGGATGTCAATGTCATTGAAAAAATAGTTGGCAAACTAGAATCTCTTGTACGACGAAAAGGTAAACTTGGACTGGAAAAGAGTGCCAAGTTGGACACATCTTGGAGAATTCCATCCACATCTCTCGTTATTAGTTCTGACGTAGTTGGTCGGGACGAAGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTGCGATGTTGAATCACATGTAACTGTGATTCCCATTGTGGGTATGGGCGGGATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAAAGTCATGGGAAAATTTGACACCAGAGCATGGGTGTGTGTTGCTGAAAATCCTGACCCAGTTCATGTTACAAGGACAATAATAGGGGCAATAGATTCTTCTCCCTATAACACAGATAACTTTGATTCACTTCAGACTGATTTGAAGAAGAAGTTGACAGGCAAGACCTTTATTGTTGTTTTAGATGATGTCTGGGATGAGCAACCAGACATGTGGGAGAATTTTCTAAAACCTTTTCACTATGGGAATAACGGGAGTAAGATTCTCCTAACAACCCGTAGCGGAAATGTTGCTTCTGTGTTCGCACCTAACAGTCTACATTACCCACTAAGTTTATTGTCGGAGGAAGATTGTTGGAAAGTGTTTTTGAAGCATTCATCCATTTCTTCTGGTTCTAAACAATATGCAATTTTAGAGCCAATTGGTAGAAAAATTGTTCAAAAGTGTAAGGGGGTACCTTTGGCTGTGAAGACACTTGGGGGTTTGTTGCGCAATAAGTATAATGAAGGAGATTGGGAGATTGTACTTGATAGTAAAATTTGGGAACTCTCGGAAGATGTCAGTCCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCACATTTAAAGCGATGTTTTGTTTATTGTTCACTGTATCCAGAGGATTATGAATTTGACAAAGACGAATTAATTTTGTTATGGATGGCTGAAGATCTTTTACAACCAAAGGAAAACAGCACCTTAGAAAATATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGGTCGTTTTTTCAACCTGTTAGTACTAACAGAAAGTTATTTATAATGCATGATCTTATGCGCGATCTAGCAACATTTTTTGCTGGGAAATTCTATTTCAAACTTAAAGAATTTGGCAATCGATGCATGATAGACAACAAAACTCGTCATTTGTCATATGTTACAAAATTTGAGGATAGCATCAAATTATTTCGAGAGGCCTATAATGGAGCAGTACACCTGAGAACATTTTTAGATTTTACTTTGCTTCGCCGTCGTCAATCAATTGATATTGAAAGCGATTCTTGGCTCTTACAACAACAATTAGGGTGTTTAAGAGTTTTGTCATTTCAACGCTCTTCTATAGAGTCATTGCTTGATTCAATAGGTGAATTAATTCATTTGCGTTATTTGAATCTGTCTGACACACCTATTGTGACATTGCCCGAGTCAATATCTAAATTATACAATCTCCAAACTTTGAAGTTGAGGAATTGTGATGAATTAGATATGCTTCCCCGCCGCATGAAAGATCTTGTGAACCTGCGTCACCTTGATATTCGAGGAGCTTCTCGTCTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGCATCTAAACTTCTTAAGTTATTATATCGTGGGCGAGCATGAAGAAAATGGGATAAGAGAACTGGGAACGCTGGACAATCTCCATGGCTCATTTTGCATTTCCAAGTTGGAGAATGTTAAGAATAGTGGTGAAGTTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACACTTTAGAATTGAATTGGCTTCCAGATGGTGACATTGATGATGTTCAAACTGAAAGAGATATACTTGGCAAGTTACAACCTCATCAAAACTTGAAAAAGTTATCAATTGTGGGTTATCGGGGTGAAACATTCCCAGATTGGTTAGGCCTTTCATGCTACTCCCATATGACCAAATTGAGTCTGGATCGTTGTATGAATTGTTGTAAGCTTCCTTCATTGGGACAGTTACCCTCTTTACAGCATCTGAAGTTTTCTAATCTTGATGGGTTGGAGAAAATTGATTTAGAGTTTTACAACAAAAGCAATGCATCATTCNNNNNNNNNNNGCCCTTCAAATGTCTTGAAACTCTGAAAATTGTAAATATGTTTAGTTGGCGGGAATGGCATTTTCCTGATGAGTTTGATGGTTTTCCTAAGCTTAGAATCCTTTCAATAAAAAGTTGTCCGGTGTTAAAGGGAGGTCTGCCTGCTCACCTTCCGGCTCTGGAGAAACTTGAGATTGTTGAATGTGAAGAGCTTGCATGTCCGCTGCCGAGGGCTCCCAAGCTTCACCAATTACTTGCAGAGGGTTCTTCTACGTCTTACTGGGGAGTGGCACCGCACAACATAGTAATTTCAGGAACCCAGCTGGCGAATTCCGTATTGGAGTGGCTACTACTGCACATCCAACTGCCACGTGTCCTTGGTCTGCGTATAATTAACTATGAGTCAGCGATATCAATTTCAGGAGATTATTTGCCGGCTTCATTACACTATCTGGAAATCTCTTCTTGTTCAAAATTAACATTCTCCGAGCACGTGCAACACAAGTCGCTAACGAAGATAGAGGTAAAGGGGTGTGGTTCACTGACGTTGTTTCCAATGGCGGGCTTTCCAAATCTCACGGAACTCGAAATCAGTGAATGCCAAAGCATGGAAAAATTTCATTGCCCGAGTCTAGTATCCCTGCCGTCGCTAGGGTTGGCTGCGCCCCACCTACAGGAGCTGTGTATAGAAGATTGCCGAAAAATCGATTGTTTTGCTGAGGAGTGCCTCCCTCCGAGTTTGAAAACTCTTGAGGTCATTGAGTGCGAGAAACTAGCGAGTTGGATTACATCAAATGTTTTGCAGAGTGAATGCCTTACCCATCTTAAGCTTGTTTCATGCTTTGATACAAAGCCGTTCCCAGGAGAGGGTTGCCTTCCTGCTTCTCTTGAGTGTCTTATATTGCGCGAGTTTCCAAATCTGGAGACGCTTGACTGCAAGGGGCTTCACCATCTTACCTCTCTCAAAACTTTAGCAATTGCTGACTGTGAAAAGCTTGAGAATATCACAGAAAAACATCGCCTTGCCTCCATAAAAAATATCTCCATAGGGGAAGAATGTCCTTTGCGGCGTAAGCTGGAAAAGATGGAACACCCACGGATTCAATTCATTCCATATGCCCAATGTGTTTTACTTACTTCTCGCTATTATGGATATACACAATCTGAGTATGATGATTTTTCTGATACTCATTCTGCAACATGTAGTGTGCAATGA 3681 0.4042 MASKLEGGAYLSSFVDAISKKLSSILEDDSVLEGNDSVLELLERLDEILCDVEPVLDDAELKQFRNDRVKKWLVDLQDALYMADDFLDELSTKAVTATPGNSSSWSRPVDSIIEDRDVNVIEKIVGKLESLVRRKGKLGLEKSAKLDTSWRIPSTSLVISSDVVGRDEDKENIIKLLLDDTCDVESHVTVIPIVGMGGIGKTTLAQLVYNDAKVMGKFDTRAWVCVAENPDPVHVTRTIIGAIDSSPYNTDNFDSLQTDLKKKLTGKTFIVVLDDVWDEQPDMWENFLKPFHYGNNGSKILLTTRSGNVASVFAPNSLHYPLSLLSEEDCWKVFLKHSSISSGSKQYAILEPIGRKIVQKCKGVPLAVKTLGGLLRNKYNEGDWEIVLDSKIWELSEDVSPALRVSYHYLPSHLKRCFVYCSLYPEDYEFDKDELILLWMAEDLLQPKENSTLENIGCAYFDELVARSFFQPVSTNRKLFIMHDLMRDLATFFAGKFYFKLKEFGNRCMIDNKTRHLSYVTKFEDSIKLFREAYNGAVHLRTFLDFTLLRRRQSIDIESDSWLLQQQLGCLRVLSFQRSSIESLLDSIGELIHLRYLNLSDTPIVTLPESISKLYNLQTLKLRNCDELDMLPRRMKDLVNLRHLDIRGASRLKEMPKGMSKLKHLNFLSYYIVGEHEENGIRELGTLDNLHGSFCISKLENVKNSGEVLEAKMGNKKHINTLELNWLPDGDIDDVQTERDILGKLQPHQNLKKLSIVGYRGETFPDWLGLSCYSHMTKLSLDRCMNCCKLPSLGQLPSLQHLKFSNLDGLEKIDLEFYNKSNASFXXXXPFKCLETLKIVNMFSWREWHFPDEFDGFPKLRILSIKSCPVLKGGLPAHLPALEKLEIVECEELACPLPRAPKLHQLLAEGSSTSYWGVAPHNIVISGTQLANSVLEWLLLHIQLPRVLGLRIINYESAISISGDYLPASLHYLEISSCSKLTFSEHVQHKSLTKIEVKGCGSLTLFPMAGFPNLTELEISECQSMEKFHCPSLVSLPSLGLAAPHLQELCIEDCRKIDCFAEECLPPSLKTLEVIECEKLASWITSNVLQSECLTHLKLVSCFDTKPFPGEGCLPASLECLILREFPNLETLDCKGLHHLTSLKTLAIADCEKLENITEKHRLASIKNISIGEECPLRRKLEKMEHPRIQFIPYAQCVLLTSRYYGYTQSEYDDFSDTHSATCSVQ 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00478 1226 PANTHER DISEASE RESISTANCE PROTEIN RP 52 892 IPR044974 GO:0006952
Arst9g00478 1226 Gene3D - 406 491 IPR036388 -
Arst9g00478 1226 Gene3D - 15 118 - -
Arst9g00478 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 421 IPR027417 -
Arst9g00478 1226 Pfam NB-ARC domain 167 409 IPR002182 GO:0043531
Arst9g00478 1226 Pfam Rx N-terminal domain 14 97 IPR041118 -
Arst9g00478 1226 Gene3D Ribonuclease Inhibitor 968 1177 IPR032675 -
Arst9g00478 1226 FunFam Probable disease resistance protein At1g63360 407 492 - -
Arst9g00478 1226 FunFam Probable disease resistance protein At1g61300 149 316 - -
Arst9g00478 1226 SUPERFAMILY RNI-like 757 1164 - -
Arst9g00478 1226 PRINTS Disease resistance protein signature 612 628 - -
Arst9g00478 1226 PRINTS Disease resistance protein signature 361 375 - -
Arst9g00478 1226 PRINTS Disease resistance protein signature 190 205 - -
Arst9g00478 1226 PRINTS Disease resistance protein signature 263 277 - -
Arst9g00478 1226 Gene3D Ribonuclease Inhibitor 542 917 IPR032675 -
Arst9g00478 1226 Gene3D - 152 316 IPR027417 -
Arst9g00478 1226 SUPERFAMILY L domain-like 482 890 - -
Arst9g00478 1226 Gene3D - 324 405 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00478 Arst-Chr9 3983242 3988826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00478 188 490 WRKY Transcription Factor Family AT5G45050 25.633 6.48e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00478 - - ahf:112708719 2273.05