LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g00469	ATGATGATAACAAATTCTCTGCATTATCTTTTTGTACTTCTTGGAGCTCTTTCTTTCCTAGCACCGGTCCTAGGGCAGGATCCATCATCAGGATTTATTAGTATAGATTGTGGACAACCTGAAAATATCAGCTACATCGAAAAAAATACAGAAATCAATTACATTTCAGATGTCAATTTTATTGATTCCGGTGTGAGTAAAAGCGTATCGCCTCAAGATAAAAATTCTCATCAACCACAATTTAATTACCTAAGGAGCTTCTCTAATGGTGTCAGAAACTGTTACAAAATAAATGTAACAAGTGGTGCTGATTATTTAATTAGAGCTAGTTTCTTGTATGGAAACTATGATGGTCTTAATAAGCTCCCACAATTTGAACTTCATCTTGGACCAAATGTGTGGAAAACAGTAAAATTCACAAATTCATCAATCAGCGTAAACTATGAGATAATCCACTCTCCACCGCAGAACCATATACATCTCTGTCTCGCTAACACGGACAATGGAACACCGTTTATTTCGGTAATAGAATTGAGGCCTTTGCCGAATGATACTTATAGCATTAGCATAAAGTCAGTTGGATCATTGGCACGTTTGGTGAGACTAGATCTCGGCTCCATCACCAACCTTTGTATCAGGTACAAAGATGATTTATACGACCGCTTATGGGAGCCTTATTCGGACAGCGAGTGGACACAATTAAGCACTTCATTGAACACTGATGAACTAAATAATTCAGTGGCATCAACGCCACCGGTAATTGTCATGAGCACTGCTGCTACACCAATAAATTCTAATGCCTCTTTGGATTTCACGTGGGATGCAGATACTGTAACCGATAGTTTTCATATTTGCATGCATTTTAATGAGATCCAAAAACTGAAAGCAAATGAAGCTAGATTATTCAATATCACCTTGAATGGCAAGCTCTTTTATGGTCCTTTTGCTCCTATATACCGTAAAACAGATACTCTATGCACTACTTCACCTTTTGATGGATTCACGACATATCAGTTATCAATTTTGAGGACAGAGTTCTCTACACTTCCACCCATCATCAATGGTATTGAGATTTATTCAGTTAGAAATTTGTCACACTTAGAAACTGAAAAAGATGATGCTGATGCTATCACAAACATCAAGGTAGCCTATAGGGTGACTAGAAATTGGCTTGGAGATCCATGTTGTCCCGAAGCATTCAAGTGGGATGGCCTAGATTGTAATTCAATTGATGGTGATGGCACTCCAAGAATAACATCCTTGAACTTGTCTACAAGTGGATTGACAGGGCACATAATTCCTGATTTCTTAAAGCTTACTATGCTAAAGACATTGGATTTATCAAACAATAACTTAACTGGAGATGTTCCTTATTTTCTGGCACAACTGCAATCACTACAAAAATTAAACCTGGAGAACAACAACTTGTCAGGTTCAATTCCAAATGAACTCCTTCAAAAACAAAGAGATGGTATATTATCATTAAGTGTGGGACAAAATCCAAATCTATGTGCATCAACTTCATGCAACCCGCAAACAAATGATAAGAGAAAGAAAAAGAGTAATGCAGTTATTATAGTGGTAGCATTAATGGCAGGGATGTTGCTGCTTCTAGTGATTGCAGCAGTTATAATCTTTCGCCAAAGAAAGCCAAATGATGCTGCTAAGAACATTATTCTTGGGAAGCCCGGTAACTCAATTAATGGTTCTCAACTGGGATCAAAGCAACGTCAATATTCATTTAACGAAGTTGTTAAGATGACCAGCAGCTTTGATAGGGTTCTTGGTAGAGGTGGATTCGGAACAGTTTACTATGGCTCTATTGAGGATACTCAATTGGCTGTCAAAATGCTTTCCTTATCATCTGTGCAAGGATATCAACAATTTGTTGCAGAGTTTACAGGAGAAAACAATAGGAAAAAGTCCTTGAATTGGAAAGATAGACTTCAAATAGCATTGGATGCAGCCCAAGGATTGGAATATTTGCATAATGGCTGTAAGCCACCTATAATCCACAGAGATATAAAATGCACAAATATTCTATTAGATGAAAACTTCCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCGGCTGATGGCGACACACATGTGTGGACAATTGCGGCCGGAACTCCAGGCTATTTAGATCCTGAGTATACGATATCAAATATATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAACCGGTGATAATAAGAATGGAAGACACGACTCATCATATAAGTCAGCGAGTTAACTCTATGGTTGCTGAAGGGGATATAACAAAAATTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAGAGCAGTTGAAATAGCAATGGCCTCTGTGTCTTCTATTTCGGTAGAAAGGCCATACATGAGTGATATAGTGAAAGAACTAAAGGAGTGTTTGGCTGTAGAGTTAACTCAAAAACATAATAGTTGTGACTTTCAAAATGAAGATTTAATTGGGCAGGTTAGTTTGAACTTGATTAGTACTGATATCAACCCCATAGTTAGGTAG	2580	0.3756	MMITNSLHYLFVLLGALSFLAPVLGQDPSSGFISIDCGQPENISYIEKNTEINYISDVNFIDSGVSKSVSPQDKNSHQPQFNYLRSFSNGVRNCYKINVTSGADYLIRASFLYGNYDGLNKLPQFELHLGPNVWKTVKFTNSSISVNYEIIHSPPQNHIHLCLANTDNGTPFISVIELRPLPNDTYSISIKSVGSLARLVRLDLGSITNLCIRYKDDLYDRLWEPYSDSEWTQLSTSLNTDELNNSVASTPPVIVMSTAATPINSNASLDFTWDADTVTDSFHICMHFNEIQKLKANEARLFNITLNGKLFYGPFAPIYRKTDTLCTTSPFDGFTTYQLSILRTEFSTLPPIINGIEIYSVRNLSHLETEKDDADAITNIKVAYRVTRNWLGDPCCPEAFKWDGLDCNSIDGDGTPRITSLNLSTSGLTGHIIPDFLKLTMLKTLDLSNNNLTGDVPYFLAQLQSLQKLNLENNNLSGSIPNELLQKQRDGILSLSVGQNPNLCASTSCNPQTNDKRKKKSNAVIIVVALMAGMLLLLVIAAVIIFRQRKPNDAAKNIILGKPGNSINGSQLGSKQRQYSFNEVVKMTSSFDRVLGRGGFGTVYYGSIEDTQLAVKMLSLSSVQGYQQFVAEFTGENNRKKSLNWKDRLQIALDAAQGLEYLHNGCKPPIIHRDIKCTNILLDENFHAKLADFGLSKCFAADGDTHVWTIAAGTPGYLDPEYTISNILTEKSDVYSFGVVLLRIITGQPVIIRMEDTTHHISQRVNSMVAEGDITKIVDSRLQGDFDNNSAWRAVEIAMASVSSISVERPYMSDIVKELKECLAVELTQKHNSCDFQNEDLIGQVSLNLISTDINPIVR	859

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g00469	859	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	670	682	IPR008271	GO:0004672\|GO:0006468
	Arst9g00469	859	ProSitePatterns	Protein kinases ATP-binding region signature.	595	616	IPR017441	GO:0005524
	Arst9g00469	859	SUPERFAMILY	Protein kinase-like (PK-like)	573	819	IPR011009	-
	Arst9g00469	859	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	627	832	-	-
	Arst9g00469	859	FunFam	Leucine-rich repeat receptor-like kinase	374	506	-	-
	Arst9g00469	859	PRINTS	Leucine-rich repeat signature	463	476	-	-
	Arst9g00469	859	PRINTS	Leucine-rich repeat signature	442	455	-	-
	Arst9g00469	859	PANTHER	OS07G0107800 PROTEIN-RELATED	33	823	-	-
	Arst9g00469	859	Gene3D	-	199	362	-	-
	Arst9g00469	859	ProSiteProfiles	Protein kinase domain profile.	524	812	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst9g00469	859	Pfam	Protein kinase domain	639	770	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst9g00469	859	SMART	serkin_6	589	812	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst9g00469	859	Pfam	Malectin-like domain	35	361	IPR024788	-
	Arst9g00469	859	Gene3D	Phosphorylase Kinase; domain 1	571	635	-	-
	Arst9g00469	859	Pfam	Leucine rich repeat	416	476	IPR001611	GO:0005515
	Arst9g00469	859	Gene3D	Transferase(Phosphotransferase) domain 1	636	836	-	-
	Arst9g00469	859	ProSiteProfiles	Leucine-rich repeat profile.	465	487	IPR001611	GO:0005515
	Arst9g00469	859	Gene3D	Ribonuclease Inhibitor	375	494	IPR032675	-
	Arst9g00469	859	SUPERFAMILY	L domain-like	377	486	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g00469	Arst-Chr9	3831625	3842219	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g00469	9	859	Receptor kinase-like Gene Family	AT1G51800	44.912	0.0	711

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Arst9g00469		Malectin_like	1.2e-106	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g00469	-		-	adu:107464157	1108.2