Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00461 ATGACGCCACTTCAACTTGCATTGCCGCCTTCACAACTGCCCAGGCCTTACAGCTGTCCGCCGCTCCTCCGTCTCTCTTCTGCCACCTCCACTGGCCGCTGGTGGTCAGCTGTTGGCACTGCTCCACCTCCTTCGTTGTCCTTCTCCTCCATCCAGCCAAGTCTCCACCTTCACACTCATCTATCTGAGGGTTGCTCTTTCATTCGAGCTGCTTGGACCCGAAGATCTCGAAGTGAAGCTGCAAAGAAACCTAACAGGAAATCATGGAAGCAGAGGACAGATATGTACATGAGACCGTTCTTACTAAACGTTTTCTTTTCAAAAAGATTTATTCATGCTAAGGTGATGCACCGAGGAACAAGCAAAGTGATCTCTGTCGCTACCACAAATGCTAAGGATCTTCGAAACTCTCTCCCCTCCTTGACAGATCACAATGCTTGTAGAGTGGTTGGAAGGCTTATTGCCGAGCGATCAAAGGAGGCTGATGTATACGCATTGGCTTATGAACCAAAAAACAATGAAAGGATTGAAGGTGGGGCTTATCTTTCTTCTTTTGTTGATGCTGTTTTGGAGAAGCTGTCTCCAATACTTGAAGATGATGACTTTGTCCTCGAAGGAAGCGACTCTGCCCTGGAGTTGCTTGGAAGGCTGGAGAGAAGTCTATTTGATGTTGGATCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCAGTGACAAGAAAGTGAAGAAGTGGCTCGTTGATCTCCAAGATGCTTTGTATAAGGCTGATGACTTGCTGGATGAACTCGCCACTAAAGCCGCCACTGCCACTCAAAGAGATCCAGGTAACTCTTCTCCCTGGTCTCACTATGTTGATTCATGTATTGAAGATAGTGCCATCAATGTCATCGAAAAAACAGTTGCCACACTAGAGTCTGTTGTAAAACGAAAAGGTTATCTTCGTCTTCTTCCGAAGGAGAGTGCTAAGATGGACATCTCGTCATGGAGAATTCCGTCCACATCTCTCGTTGTAAGTACTGACATATTTGGTCGGGACCAAGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTGCGATGTTGGGTCACCTGTGACTGTGATCCCCATCGTGGGTATGGGTGGAATAGGAAAAACTACTTTGGCTCAACTGGTTTACAGTGATGTCAAAGTCGTGGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATCCTGACCCTATTAATGTTACAAAGACAATAATAGGGGCAATAGATTCTTGTCCGGGTAACATGGATAAGTTTGATTCACTTCGGAATAATTTGAAGGAAACGGATAATTTTGATTCACTTCAGACTAATTTGAAAGAAAAGTTGACAGGAAAGACATTTTTAGTTGTCTTAGATGATGTCTGGCATGATCGACGAGACATGTGGGAGGATTTTTTAAAACCTTTTCGTTTTGGGGATAATGGAAGTAAGATTCTTCTAACAACCCGTAATGAAAATGTTGCTTCTGTGTTCACGGCTAGTAATTTACATTATCGACTAAGTTTATTGTTGATTGAAGATTGTTGGTCGATGTTTTTGAAGCATTCATCTATTTCTACTAATTCTAAACAATATGCAACTCTAGAACAAATTGGTAGAAAAATTGTTGAAAAATGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGTAATAAGTTAAATAAAGGAGATTGGGAAAATATACTTGAAAGTGAAATGTGGGAACTCTCGGAAGATGACAGTAAGATTACTCCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCCTATTTGAAGCGGTGTTTTGTTTATTGCTCATTATATCCGGAGGATTATGAATTTGACAAAGACGAATTAATTTTGCTATGGATTGCTGAAGATCTTTTACAACCAAAAGAAAACAACACATTAGAAAAAATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGATCATTCTTTCAACCTTCTAGTGCTAGTGGAAAGTTATTTGTAATGCATGATCTCATGCATGATCTAGCAAAGTTTTTTGCTGGAAAATTCTATTTCAATCTCAAAGAATTTGGCAATCGGCACATGATAGATAGCAACATTCGACATTTGTCATATACCACAACATATGAGGACAACTTCAAGTTATTTCAAGAGGACTTTAATGGAACAACACACATGAGAACATTTTTAAATTTTCCTTTGTTTCGCTTTCAAGCATCAATTACTATGGAAAGCGAGTTTTGGCTCTTAGGACAACAATTGGAGTGTTTAAGAGTTTTGTCATTTAAATACATTTTTCTAAAATCATTACCTGATTCAGTAGGTGAATTGATTTATTTGCGTTATTTGAATTTATCTTTCACACTTATCGAGACATTGTCTGAGTAA 2412 0.3984 MTPLQLALPPSQLPRPYSCPPLLRLSSATSTGRWWSAVGTAPPPSLSFSSIQPSLHLHTHLSEGCSFIRAAWTRRSRSEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVVGRLIAERSKEADVYALAYEPKNNERIEGGAYLSSFVDAVLEKLSPILEDDDFVLEGSDSALELLGRLERSLFDVGSVLDDAELKQFSDKKVKKWLVDLQDALYKADDLLDELATKAATATQRDPGNSSPWSHYVDSCIEDSAINVIEKTVATLESVVKRKGYLRLLPKESAKMDISSWRIPSTSLVVSTDIFGRDQDKENIIKLLLDDTCDVGSPVTVIPIVGMGGIGKTTLAQLVYSDVKVVGKFDTRAWVCVAENPDPINVTKTIIGAIDSCPGNMDKFDSLRNNLKETDNFDSLQTNLKEKLTGKTFLVVLDDVWHDRRDMWEDFLKPFRFGDNGSKILLTTRNENVASVFTASNLHYRLSLLLIEDCWSMFLKHSSISTNSKQYATLEQIGRKIVEKCKGLPLAVKTLGGLLRNKLNKGDWENILESEMWELSEDDSKITPALRVSYHYLPSYLKRCFVYCSLYPEDYEFDKDELILLWIAEDLLQPKENNTLEKIGCAYFDELVARSFFQPSSASGKLFVMHDLMHDLAKFFAGKFYFNLKEFGNRHMIDSNIRHLSYTTTYEDNFKLFQEDFNGTTHMRTFLNFPLFRFQASITMESEFWLLGQQLECLRVLSFKYIFLKSLPDSVGELIYLRYLNLSFTLIETLSE 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00461 803 Gene3D - 74 189 - -
Arst9g00461 803 SUPERFAMILY Translational machinery components 96 168 - -
Arst9g00461 803 FunFam 50S ribosomal protein L18 63 193 - -
Arst9g00461 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 615 IPR027417 -
Arst9g00461 803 Gene3D - 190 299 - -
Arst9g00461 803 SUPERFAMILY L domain-like 670 802 - -
Arst9g00461 803 PANTHER DISEASE RESISTANCE PROTEIN RP 226 796 IPR044974 GO:0006952
Arst9g00461 803 CDD Ribosomal_L18_L5e 89 161 - -
Arst9g00461 803 Pfam NB-ARC domain 345 601 IPR002182 GO:0043531
Arst9g00461 803 Gene3D - 322 508 IPR027417 -
Arst9g00461 803 Pfam Rx N-terminal domain 185 270 IPR041118 -
Arst9g00461 803 Gene3D - 516 599 IPR042197 -
Arst9g00461 803 FunFam Probable disease resistance protein At1g63360 601 686 - -
Arst9g00461 803 PRINTS Disease resistance protein signature 454 468 - -
Arst9g00461 803 PRINTS Disease resistance protein signature 552 566 - -
Arst9g00461 803 PRINTS Disease resistance protein signature 368 383 - -
Arst9g00461 803 Gene3D - 600 686 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00461 Arst-Chr9 3773078 3779303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00461 366 685 WRKY Transcription Factor Family AT5G45050 24.390 1.19e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00461 - - adu:127741461 1219.14