Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00425 ATGGGAAAAGCTACAAGGTGGTTGAAGGGGCTATTAGGAATGAAAAAGGAGAATAAAGAGAATAGTAATAAGGATCAACACCAGATTGAAAATTCAGGGTCATTGCCAACAATAACATCAGCAATGGCTTCTTCTTTTTCTTCTTCTTATGACAAGAAAGAGAAGAAAAGATGGAGTTTTGCTAAGCAAGTAGAGAAGGATAATAATAATGATAATAATAGAAACATTGTTGCTCCTTCCAATGGTGCAGCTTTGGATTCTTCTTCTTCTGATGGTGCTTGGATTAGATCCTATATTGCTGACACTGAGAGTGAGCAGAACAAGCATGCAATTGCTGTGGCAGCTGCCACTGCCGCGGCTGCAGATGCCGCCGTGGCAGCTGCGCAGGCGGCCGTGGCAGTTGTTAGGCTGACAAGCCAAGGGAGAGGCACATTGTTCAGTGGCAGCAGAGACAAGTGGGCTGCTGTAAAAATCCAAACTTTCTTCAGAGGCTATTTGGCAAGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGTTTTCTAGTTAGAAAGAGGGCTGCCGCAACTCTTCACAGTATGCAGGCTCTAATTCGAGCTCAGGCCGCCGTCCGGTCGCAGCGCGCCCGCCGTTCCATGAGCAAAGACAATAGGTTCCTCCCTGAAGTTCTTGCAAGAAAATCTCTGGAACGATTTGATGAAACAAGAAGTGAATTCCACAGCAAAAGGATGATACCTACATCATATGAAGCATCAATGAATGGATTTGATGAGTCTCCAAAAATTGTTGAAATTGACACTTACAAGACTAGATCATCAAGGTCAAGGCGTTACACCTCTACAATGTCCGAATGTGGTGAAGATCCGCCATACCACGCTGTCTCATCCCCTCTTCCCGGCCGAATCTCGGTCCCAGATTGCCGGCACCTTCAAGATTTCGATTGGTACTTGAGTGCCGACGAATGTAGGTATTCGACGGCACACAACACTCCAAGATTTGCAAACTACGCGCACCCTAAAATCGCCCCGGCCACGCCGGCTAAAAGTGTGTGTGGAGGGGACACATTTTTTAGGCCTTATTCAAATTTTCCAAATTACATGTCAAATACTCAATCTTTTAATGCAAAATTAAGGTGTCATAGTGCTCCAAAGCAAAGGCCTGAGCCAAAGAAGAGGCTTTCACTCAATGAAATGATGGCAGCAAGGAACAGCATAAGTGGTGTTAGAATGCATAGGCCATCCAATTTTCAAGGTCAAGAATCATGGAATTTTTGA 1293 0.4478 MGKATRWLKGLLGMKKENKENSNKDQHQIENSGSLPTITSAMASSFSSSYDKKEKKRWSFAKQVEKDNNNDNNRNIVAPSNGAALDSSSSDGAWIRSYIADTESEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSRDKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGFLVRKRAAATLHSMQALIRAQAAVRSQRARRSMSKDNRFLPEVLARKSLERFDETRSEFHSKRMIPTSYEASMNGFDESPKIVEIDTYKTRSSRSRRYTSTMSECGEDPPYHAVSSPLPGRISVPDCRHLQDFDWYLSADECRYSTAHNTPRFANYAHPKIAPATPAKSVCGGDTFFRPYSNFPNYMSNTQSFNAKLRCHSAPKQRPEPKKRLSLNEMMAARNSISGVRMHRPSNFQGQESWNF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00425 430 Gene3D - 93 176 - -
Arst9g00425 430 Pfam IQ calmodulin-binding motif 153 172 IPR000048 GO:0005515
Arst9g00425 430 Pfam IQ calmodulin-binding motif 178 192 IPR000048 GO:0005515
Arst9g00425 430 ProSiteProfiles IQ motif profile. 199 228 IPR000048 GO:0005515
Arst9g00425 430 Pfam Protein of unknown function (DUF4005) 331 413 IPR025064 -
Arst9g00425 430 MobiDBLite consensus disorder prediction 63 84 - -
Arst9g00425 430 MobiDBLite consensus disorder prediction 1 36 - -
Arst9g00425 430 ProSiteProfiles IQ motif profile. 175 202 IPR000048 GO:0005515
Arst9g00425 430 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Arst9g00425 430 SMART iq_5 173 194 IPR000048 GO:0005515
Arst9g00425 430 SMART iq_5 150 172 IPR000048 GO:0005515
Arst9g00425 430 ProSiteProfiles IQ motif profile. 151 179 IPR000048 GO:0005515
Arst9g00425 430 MobiDBLite consensus disorder prediction 10 26 - -
Arst9g00425 430 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00425 Arst-Chr9 3500583 3503378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00425 1 416 IQD Protein Family AT3G16490 50.580 5.30e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00425 - - gmx:100797686 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00425 9 3500583 3503378 Arst9g00425 9 3500583 3503378 ECH
Arst7g02240 7 51685723 51687073 Arst9g00425 9 3500583 3503378 PCT