Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00419 ATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTCCTCAAGCCAAGTTCTTCCTTATGGAAGTAAGAGACTTTGGTGCAAGATGTTTCTCTGGAGCCATAGGAACATACATAGAGCTATTTCAAGCAAATCAACACAGGTGAATCCTGGTGTGGCTGTAACGCACAATCCATACGGGTACTCTTCCGACACCCTTGAACCGAAGCACAAGCAGTCACCAGGAAATGTGGAATGCTTAATACGCTTAGTATGTTCGCAATTGTTGATTCGCGGTGATGAACTAATTATGCGTTTGGGTGTTCTAAGAGGCGGCGCAGAGGTGGCAGTGAAGCGAATATCACAAGAGAATGACGGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGAAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAAATATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATGGCCAAGTTGCTAGCACAAGAAAGTTGGTTGGAACAGTTGGTTACATGGCTCCAGAAGTGATCAAGACCGGACAAGCCTTGACTCGCACGGATGTGTTCATGTTTGGAATCTTGATTTTAGAGGTCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGCCACCTCTTGTGGAGTTTGTGTGGGGACTAATGGTTAAAGGGGAACTAATGAATGCACTTGATGAGAGGTTAAGTGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAATATGAGACAAGTTGTGAGTATTTTAGAAGGGAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGCGGATACTTCCCCAGCAATCAGCATCTCCTTCGTCTCCTTCGTCTCATCTCTCTGCTCACTATCGCGATCTCAAGCTTTCTCCCTCTCTCGTCTCGGGTCTCGCACCCAAGGTTTTCGTCGCTCTCCGTGTCGCCAGTCGTCACCATCTTGCACTCAGTCGCACTCGCACGCCTTCCCTGAGCTCGTTGTCGCCGGCGGCAGAAGCACCCAGACCCGGGACTGGTCGTCGTCGTCGTCGCTCCATGGCTCCTCACCGTCTCGGACTTAG 1368 0.4656 MTHCSADRVMLRRHSSSQVLPYGSKRLWCKMFLWSHRNIHRAISSKSTQVNPGVAVTHNPYGYSSDTLEPKHKQSPGNVECLIRLVCSQLLIRGDELIMRLGVLRGGAEVAVKRISQENDGVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDNGSLDKRVFCDESMMLNCEERIRNIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTRKLVGTVGYMAPEVIKTGQALTRTDVFMFGILILEVMCGRRPMEEGKPPLVEFVWGLMVKGELMNALDERLSAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGNNEGGEESENENADTSPAISISFVSFVSSLCSLSRSQAFSLSRLGSRTQGFRRSPCRQSSPSCTQSHSHAFPELVVAGGRSTQTRDWSSSSSLHGSSPSRT 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00419 455 Pfam Protein tyrosine and serine/threonine kinase 108 352 IPR001245 GO:0004672|GO:0006468
Arst9g00419 455 MobiDBLite consensus disorder prediction 435 455 - -
Arst9g00419 455 MobiDBLite consensus disorder prediction 403 423 - -
Arst9g00419 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Arst9g00419 455 PANTHER - 104 363 - -
Arst9g00419 455 FunFam L-type lectin-domain containing receptor kinase S.4 161 365 - -
Arst9g00419 455 SMART serkin_6 91 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00419 455 SUPERFAMILY Protein kinase-like (PK-like) 101 353 IPR011009 -
Arst9g00419 455 ProSiteProfiles Protein kinase domain profile. 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00419 455 Gene3D Phosphorylase Kinase; domain 1 99 161 - -
Arst9g00419 455 Gene3D Transferase(Phosphotransferase) domain 1 162 378 - -
Arst9g00419 455 MobiDBLite consensus disorder prediction 403 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00419 Arst-Chr9 3394613 3398612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00419 102 300 Receptor kinase-like Gene Family AT4G04960 68.966 5.18e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst9g00419 PK_Tyr_Ser-Thr 6.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00419 - - ahf:112782032 720.309