Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00410 ATGAATCGGAGGTGCTCCGGGTGCAGCAAAAATGGTCACAACTCCAGAACATGCCCTTATTACTCATCCTCTGCGTCTCGCACCACCGTTACTACAGTGAAGCTCTTTGGGGTGCGGCTCTCCATGACCCACGGATCAGGATCATGCTCCGCCGCATCACCCAATCATAACTCTCCTTTCTCACACTACTCCTCTGACGGTTACGTGTTGGATAGTGAGCCATCAACCCCTGCTGCCACCATCAACTGCCACCATCCTCCTCCTTCCATAAACAAAGGCATTCCATGGAGCCAAGAAGAACATCGATTGTTCTTAATTGGATTGGAGAAATTAGGAAAAGGAGACTGGCGTGGAATATCTCGAAATTACGTTGTATCACGAACGCCAACTCAGGTAGCAAGTCATGCTCAGAAATACTTTATCCGGCTGCGGCAGAGCAACGCCACGCCGCGAAAACGACGATCAAGTCTTTTCGACATGTTCAAAAATTTGGCTTCGAATTCGCCTTCACTAAAAGAAGAACAAGTATTACTTCAACCTTCTAAGAACTCACAACTTAGCAATGTGGAAGAAGAGCTCAATGAAACTATAATGGTATCGAATGAAGCCACACCAGCGTCACCGCTTCCCGGATTCTTCCGGCCGCCTTATCCGGCTCTCCCATTTTCCTCATGGCCATCAAGTGCCTGTTCCTTTGGAGAAGCTACCCTAATCTTAGATGGAAGGCCATTGCATTAG 738 0.481 MNRRCSGCSKNGHNSRTCPYYSSSASRTTVTTVKLFGVRLSMTHGSGSCSAASPNHNSPFSHYSSDGYVLDSEPSTPAATINCHHPPPSINKGIPWSQEEHRLFLIGLEKLGKGDWRGISRNYVVSRTPTQVASHAQKYFIRLRQSNATPRKRRSSLFDMFKNLASNSPSLKEEQVLLQPSKNSQLSNVEEELNETIMVSNEATPASPLPGFFRPPYPALPFSSWPSSACSFGEATLILDGRPLH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00410 245 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Arst9g00410 245 SMART sant 92 142 IPR001005 -
Arst9g00410 245 CDD SANT 95 140 IPR001005 -
Arst9g00410 245 ProSiteProfiles Zinc finger CCHC-type profile. 3 19 IPR001878 GO:0003676|GO:0008270
Arst9g00410 245 PANTHER TRANSCRIPTION FACTOR KUA1 1 184 - -
Arst9g00410 245 Gene3D - 94 145 - -
Arst9g00410 245 FunFam transcription factor MYB1R1 94 145 - -
Arst9g00410 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 144 IPR017930 -
Arst9g00410 245 NCBIfam myb-like DNA-binding domain, SHAQKYF class 91 142 IPR006447 GO:0003677
Arst9g00410 245 SUPERFAMILY Homeodomain-like 91 144 IPR009057 -
Arst9g00410 245 ProSiteProfiles SANT domain profile. 96 144 IPR017884 -
Arst9g00410 245 ProSiteProfiles Myb-like domain profile. 95 140 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00410 Arst-Chr9 3341497 3342899 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst9g00410 Myb_DNA-binding 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00410 - - aip:107617323 478.018