Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00409 ATGGAAAGTTTCGCCGGTGGCGGTGTTAAGGACGTGTACGGCGAGGATAGAGCCACAGAGGATCAGTTTGTGACACCATGGAGTGTTTCTGTTGCTAGTGGGTATACATTGTTGCGAGATCCTCACTTCAATAAAGGATTGGCATTCACTGAACAAGAAAGGGATGCACATTACTTGCGTGGTCTTCTTCCTCCATCAGTTATTTCTCAAGAAACTCAGGTGAAGAGACTCATTCAACTAATACGGCAGTATCAAGTACCATTGCTGAAGTATGTGGCAATGATGGATCTTCAGGAGAGCAATGAAAGGTTGTTTTATAGGCTTCTTATTGATCATGTTGAGGAGTTACTTCCTGTTGTCTACACTCCAACAGTTGGTGAAGCTTGCCAGAAATATGGCAGCATCTTCTCAAATCCTCAAGGTCTTTTTATAAGCTTGAAAGAGAAAGGGAGGATTCTTGAAGTTCTAAGGAATTGGCCTGAGATGAACATTCAAGTCATAGTTGTAACTGATGGAGAAAGGATCCTAGGTCTAGGGGACCTTGGCTGTCAGGGAATGGGAATACCAGTTGGGAAACTTTCTTTATATACAGCACTTGGAGGAGTTCGTCCTTCTGCTTGCTTGCCTATTACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATGATGAATTATACATTGGTCTAAGGCATAAAAGAGCAACTGGCAAGGAATATGATGAACTTCTGCATGAATTCATGACTGCAGTAAAACAAAATTATGGAGAAAAAATCCTTGTTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACACATCTTGTTTTCAATGATGATATTCAGGGAACAGCGTCGGTGGTCCTCGCCGGACTTGTCGCGGCCCTGAAATTGGTCGGAGGAAACTTAGCTGATCACAAGTTCCTCTTCCTTGGGGCTGGAGAGGCTGGCACCGGAATAGCAGAACTCATAGCCCTTGAAATATCAAAACGGACAAATATTGAAGTGGAAAAAGCTCGCAAGAACATTTGGTTGGTGGATTCAAAGGGATTGATTGTTAGTTCCAGAAAGGAATCACTTCAACATTTCAAGAAGCCTTGGGCTCATGAACATGAACCTATATCAGATCTGGTCAAAGCAGTTAATCAAATTAAGCCAACAGTATTGATTGGAACATCAGGACAAGGCCAAACTTTTACTCAAGCAGTGGTTGAGGCTATGGCCTCCAATAATGAGAAACCTATTATCCTAGCTCTTTCCAACCCAACATCACAATCAGAATGTACCGCTGAACAAGCTTATAATTGGACTAAGGGACGTGTAATTTTTGCTAGTGGAAGCCCATTTGACCCGGTTGAAATTGATGGAAAGAAACATGTGNGTTTGATAATGTCTGGAACAATCCGAGTTCATGATGACATGCTTCTAGCAGCTTCTGAGGCATTGGCTTCACAGGTGAGCAAAGAGGACTATGAAAAGGGGCTTATATATCCTCCCTTCACTAACATTAGAAAGATTTCAGCAAATATAGCTGCAAATGTGGCTGCTAAGGCCTATGAGCTTGGCTTGGCCACTCGACTTCCTCAACCAAAAGATTTGGTGAAGTTTGCTGAGAGCTGCATGTATACTCCAACCTATAGAAGCTACAGATGA 1677 0.4222 MESFAGGGVKDVYGEDRATEDQFVTPWSVSVASGYTLLRDPHFNKGLAFTEQERDAHYLRGLLPPSVISQETQVKRLIQLIRQYQVPLLKYVAMMDLQESNERLFYRLLIDHVEELLPVVYTPTVGEACQKYGSIFSNPQGLFISLKEKGRILEVLRNWPEMNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLRHKRATGKEYDELLHEFMTAVKQNYGEKILVQFEDFANHNAFDLLERYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHKFLFLGAGEAGTGIAELIALEISKRTNIEVEKARKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPISDLVKAVNQIKPTVLIGTSGQGQTFTQAVVEAMASNNEKPIILALSNPTSQSECTAEQAYNWTKGRVIFASGSPFDPVEIDGKKHVXLIMSGTIRVHDDMLLAASEALASQVSKEDYEKGLIYPPFTNIRKISANIAANVAAKAYELGLATRLPQPKDLVKFAESCMYTPTYRSYR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00409 558 FunFam Malic enzyme 287 558 - -
Arst9g00409 558 Gene3D - 32 286 IPR037062 GO:0004471
Arst9g00409 558 Pfam Malic enzyme, NAD binding domain 289 526 IPR012302 GO:0051287
Arst9g00409 558 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 13 288 IPR046346 -
Arst9g00409 558 Pfam Malic enzyme, N-terminal domain 98 279 IPR012301 GO:0004471
Arst9g00409 558 CDD NAD_bind_1_malic_enz 289 552 - -
Arst9g00409 558 ProSitePatterns Malic enzymes signature. 285 301 IPR015884 GO:0004471
Arst9g00409 558 SMART Malic_M_2 289 527 IPR012302 GO:0051287
Arst9g00409 558 Gene3D - 287 558 - -
Arst9g00409 558 PIRSF ME 10 558 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 104 128 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 419 435 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 316 332 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 260 278 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 164 193 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 200 222 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PRINTS Malic enzyme signature 285 301 IPR001891 GO:0004470|GO:0004471
Arst9g00409 558 PANTHER MALIC ENZYME-RELATED 7 557 - -
Arst9g00409 558 SMART malic_2 98 279 IPR012301 GO:0004471
Arst9g00409 558 FunFam Malic enzyme 32 286 - -
Arst9g00409 558 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 289 557 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00409 Arst-Chr9 3328122 3335028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00409 K00029 - gmx:100791514 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00409 9 3328122 3335028 Arst9g00409 9 3328122 3335028 ECH
Arst9g00409 9 3328122 3335028 Arst7g02250 7 51807692 51813601 ECH
Arst5g03134 5 88366321 88371688 Arst9g00409 9 3328122 3335028 ECH
Arst8g01170 8 16213667 16218449 Arst9g00409 9 3328122 3335028 ECH
Arst9g00409 9 3328122 3335028 Arst8g01170 8 16213667 16218449 ECH
Arst9g00409 9 3328122 3335028 Arst5g04420 5 105523639 105526956 ECH
Arst9g00409 9 3328122 3335028 Arst2g00303 2 2738694 2740504 ECH
Arst9g00409 9 3328122 3335028 Arst4g03320 4 111255256 111257627 ECH
Arst7g02250 7 51807692 51813601 Arst9g00409 9 3328122 3335028 PCT