Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00336 ATGCCTGCCATAGCATTCGGGCGTTTTGATGATTCTTTCAGCTTTGGCTCCATCAAAGCCTACATTGCTGAGTTCATCTCAACATTGATCTTTGTTTTTGCTGGTGTTGGTTCAGCAATAGCCTATGGAAAGCTGACATCAGATGCAGCACTTGACCCTGCTGGATTGGTAGCAGTAGCTGTGTGCCATGGATTTGCTCTGTTTGTGGCGGTTTCTGTTGGAGCCAACATCTCTGGTGGCCATGTCAACCCTGCTGTCACTTTTGGTTTGGCACTTGGAGGCCAAATCACACTACTTTCTGGAATCTTCTACTGGATTGCTCAGCTTCTTGGTTCCATTGTTGCATGTTTCCTCCTTTCTTATGTCACCGGTGGATTGACAACTCCAATCCATAGTGTGGCAGAAGGAGCAGGAGCATTTTAAGGAGTAGTGACTGAAATCATAATCACATTTGGATTGGTGTACACTGTGTATGCCACAGCAGCTGACCCCAAGAAGGGCTCACTAGGCACCATTGCACCCATTGCAATTGGTTTCATTGTTGGTGCCAACATCTTGGCCGCCGGTCCCTTCTCCGGCGGCTCCATGAACCCGGCTCGCTCCTTCGGCCCTGCCGTCGTCAGCGGCAACTTCCATGACAACTGGATCTACTGGGTTGGACCCCTCATTGGTGGTGGCCTTGCTGGCCTTGTCTATGCCAATGTCTTCTTGCCCTCTGACCATGCACCTCTTTCAAGTGAATTTTGA 747 0.4967 MPAIAFGRFDDSFSFGSIKAYIAEFISTLIFVFAGVGSAIAYGKLTSDAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLALGGQITLLSGIFYWIAQLLGSIVACFLLSYVTGGLTTPIHSVAEGAGAFXGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFHDNWIYWVGPLIGGGLAGLVYANVFLPSDHAPLSSEF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00336 248 FunFam Probable aquaporin TIP1-1 2 248 - -
Arst9g00336 248 SUPERFAMILY Aquaporin-like 13 241 IPR023271 -
Arst9g00336 248 Gene3D Glycerol uptake facilitator protein. 2 245 IPR023271 -
Arst9g00336 248 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 Pfam Major intrinsic protein 16 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00336 248 PANTHER AQUAPORIN-8 4 239 IPR034294 -
Arst9g00336 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Arst9g00336 248 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00336 Arst-Chr9 2832314 2834478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00336 1 246 Major Intrinsic Protein MIP AT3G16240 79.352 1.20e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00336 K09873 - gmx:100803901 437.958