Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00309 ATGGAGGTGTTCAAAGCAGTTGCCAAGAACGAACTTGCAACTCATGGAAGTGTTGCTATCAGAGCTGACCAGAAGAGTTATAGTTACAGGCAACTAATCTTGTCCGCAGAGAAGATATCTAATATATTGTGCGGCAGTGATGTAAAGGCAGGAAACCTTAGTGGAGCTCGGATAGGAATTGTAGCCAAACCCTCTGCCGAATTTGTAGCTGGAGTACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTAAGCTATCCAGAACCAGAGCTCTTACATGTGATTAATAATTCGGATGTGTCCACAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAACCTTGCCAATAAAACCTCTTCTCAGTTTTTTCATCTCCCACCTGTTCTCGCTAAGCCCTCAGAGAAAAGCAGTGATGAAGATTCACAAAATGGGGAAATTGATGTTGATAGAATTTTCCGGGACAATATTGGAAAACCAAGTGAAGATCCAGCACTGATTTTGTACACGAGTGGGACAACAGGTAAACCTAAAGGAGTGGTTCATACTCACAGAAGCATTGCTGCCCAGGTCCAAACCTTGGCAAATGCATGGGAGTATACATCTGCTGATAAGTTTCTACACTGCCTACCGTTGCATCATGTTCATGGACTTTTCAATGCTTTATTTGCCCCTCTCTATGCAGGATCCTCGGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCATCCGAAGGATCTAAGGTTGATGATGCTATAACTGTTTTCACTGGAGTTCCAACTATGTACACCCGGTTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCCACCTCAGCATCTGCTGCACGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTCCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCTTTGAAAGGAGAGCGTAAACCAGGCACTGTTGGCAAACCATTTCCTGGTATAGAGGTCAAGATTCTTTCAGATGAGGACAGTGGGAAAGAAGAGACTAAAGTGGGGGAGCTTTGTGTTAAAAGCCCTTCATCTTTTAAAGAATATTGGAAACTTCCGGAGATAACGAAAGAATCATTTACTGAAGATGGATTCTTCAAGACTGGGGATGCAGTTACTACAGATAAAGATGGATACTACATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTACAAACTATCTGCCTTAGAAATTGAATCAGTTATACTAGAGCATCAAGCTGTCGCGGAATGCTGCGTTTTGGGCTTACCTGACAAAGATTATGGGGAAGTTGTCGGCGCGATTATTGTACCAGAGGCTGATGTCAAGAGAAAGCGAGATGAAGAATCAAAGCCTGTTCTAAGCCTGGAAGAGTTATCCAGCTGGGCCAAACCTAAAATTGCACCTTACAAGATACCAACAAAACTTTTTGTTTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAAATGCTAGCTTCGGAACAGTAA 1632 0.4314 MEVFKAVAKNELATHGSVAIRADQKSYSYRQLILSAEKISNILCGSDVKAGNLSGARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEPELLHVINNSDVSTILSTEDHSELMQNLANKTSSQFFHLPPVLAKPSEKSSDEDSQNGEIDVDRIFRDNIGKPSEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLANAWEYTSADKFLHCLPLHHVHGLFNALFAPLYAGSSVEFMPKFSVRGIWQRWRESYPSEGSKVDDAITVFTGVPTMYTRLIQGYHAMDPELQATSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIEVKILSDEDSGKEETKVGELCVKSPSSFKEYWKLPEITKESFTEDGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVILEHQAVAECCVLGLPDKDYGEVVGAIIVPEADVKRKRDEESKPVLSLEELSSWAKPKIAPYKIPTKLFVWDSLPRNAMGKVNKKELKKMLASEQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00309 543 Gene3D - 4 427 IPR042099 -
Arst9g00309 543 Pfam AMP-binding enzyme 14 433 IPR000873 -
Arst9g00309 543 Gene3D - 430 543 IPR045851 -
Arst9g00309 543 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Arst9g00309 543 SUPERFAMILY Acetyl-CoA synthetase-like 13 541 - -
Arst9g00309 543 CDD MCS 17 537 - -
Arst9g00309 543 PRINTS AMP-binding signature 178 186 IPR020459 -
Arst9g00309 543 PRINTS AMP-binding signature 166 177 IPR020459 -
Arst9g00309 543 PANTHER ACYL-COA SYNTHETASE 27 539 - -
Arst9g00309 543 Pfam AMP-binding enzyme C-terminal domain 444 529 IPR025110 -
Arst9g00309 543 FunFam Acyl-CoA synthetase family member 3 9 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00309 Arst-Chr9 2661314 2668560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00309 166 541 Monolignol Biosynthesis Gene Families AT4G19010 28.535 1.22e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00309 K18660 - gmx:100813324 922.154