Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00308 ATGAGTTGCTCATTTAAGACTTTCAACAAACACCTCGCACTCCTCTGCTTCCATAAGTGCATCACCTCTTATGGTTTCATACCTTCACTTTCTCACTTTCTTCCACCGCTTCTGAGCTCGCGTTCCGCTCAGCTTCTACATCACTTGGCTTCTCATTCTGCTTCAGTTATGGAGGTGTTCAAAGCAGTTGCCAAGAACGAACTTGCAACTCATGGAAGTGTTGCTATCAGAGCTGACCAGAAGAGTTATAGTTACAGGCAACTAATCTTGTCCGCAGAGAAGATATCTAATATATTGTGCGGCAGTGATGTAAAGGCAGGAAACCTTAGTGGAGCTCGGATAGGAATTGTAGCCAAACCCTCTGCCGAATTTGTAGCTGGAGTACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTAAGCTATCCAGAACCAGAGCTCTTACATGTGATTAATAATTCGGATGTGTCCACAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAACCTTGCCAATAAAACCTCTTCTCAGTTTTTTCATCTCCCACCTGTTCTCGCTAAGCCCTCAGAGAAAAGCAGTGATGAAGATTCACAAAATGGGGAAATTGATGTTGATAGAATTTTCCGGGACAATATTGGAAAACCAAGTGAAGATCCAGCACTGATTTTGTACACGAGTGGGACAACAGGTAAACCTAAAGGAGTGGTTCATACTCACAGAAGCATTGCTGCCCAGGTCCAAACCTTGGCAAATGCATGGGAGTATACATCTGCTGATAAGTTTCTACACTGCCTACCGTTGCATCATGTTCATGGACTTTTCAATGCTTTATTTGCCCCTCTCTATGCAGGATCCTCGGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCATCCGAAGGATCTAAGGTTGATGATGCTATAACTGTTTTCACTGGAGTTCCAACTATGTACACCCGGTTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCCACCTCAGCATCTGCTGCACGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTCCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCTTTGAAAGGAGAGCGTAAACCAGGCACTGTTGGCAAACCATTTCCTGGTATAGAGGTCAAGATTCTTTCAGATGAGGACAGTGGGAAAGAAGAGACTAAAGTGGGGGAGCTTTGTGTTAAAAGCCCTTCATCTTTTAAAGAATATTGGAAACTTCCGGAGATAACGAAAGAATCATTTACTGAAGATGGATTCTTCAAGACTGGGGATGCAGTTACTACAGATAAAGATGGATACTACATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTACAAACTATCTGCCTTAGAAATTGAATCAGTTATACTAGAGCATCAAGCTGTCGCGGAATGCTGCGTTTTGGGCTTACCTGACAAAGATTATGGGGAAGTTGTCGGCGCGATTATTGTACCAGAGGCTGATGTCAAGAGAAAGCGAGATGAAGAATCAAAGCCTGTTCTAAGCCTGGAAGAGTTATCCAGCTGGGCCAAACCTAAAATTGCACCTTACAAGATACCAACAAAACTTTTTGTTTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAAATGCTAGCTTCGGAACAGTAA 1800 0.4333 MSCSFKTFNKHLALLCFHKCITSYGFIPSLSHFLPPLLSSRSAQLLHHLASHSASVMEVFKAVAKNELATHGSVAIRADQKSYSYRQLILSAEKISNILCGSDVKAGNLSGARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEPELLHVINNSDVSTILSTEDHSELMQNLANKTSSQFFHLPPVLAKPSEKSSDEDSQNGEIDVDRIFRDNIGKPSEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLANAWEYTSADKFLHCLPLHHVHGLFNALFAPLYAGSSVEFMPKFSVRGIWQRWRESYPSEGSKVDDAITVFTGVPTMYTRLIQGYHAMDPELQATSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIEVKILSDEDSGKEETKVGELCVKSPSSFKEYWKLPEITKESFTEDGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVILEHQAVAECCVLGLPDKDYGEVVGAIIVPEADVKRKRDEESKPVLSLEELSSWAKPKIAPYKIPTKLFVWDSLPRNAMGKVNKKELKKMLASEQ 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00308 599 FunFam Acyl-CoA synthetase family member 3 65 483 - -
Arst9g00308 599 SUPERFAMILY Acetyl-CoA synthetase-like 55 597 - -
Arst9g00308 599 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Arst9g00308 599 Gene3D - 486 599 IPR045851 -
Arst9g00308 599 PANTHER ACYL-COA SYNTHETASE 59 595 - -
Arst9g00308 599 Pfam AMP-binding enzyme 70 489 IPR000873 -
Arst9g00308 599 CDD MCS 73 593 - -
Arst9g00308 599 Gene3D - 60 483 IPR042099 -
Arst9g00308 599 Pfam AMP-binding enzyme C-terminal domain 500 585 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00308 Arst-Chr9 2661058 2668560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00308 222 597 Monolignol Biosynthesis Gene Families AT4G19010 28.535 1.12e-40 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00308 K18660 - gmx:100813324 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00308 9 2661058 2668560 Arst9g00308 9 2661058 2668560 ECH