Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00301 ATGGGAATGGACATGTCTTCAAACACCAATAAGGACTTGTTCTCCTCTCCAACTCTCTCCCTCACCCTTGCTGGGATTTTTAATAACCAAGTAGAGGAAGTAGGAGATGAGGGAAGTAGAGAGTGTTCAAGGAAAGAGGACACCACCACCACCACCACCGTTGATGTAAGCAGCGAGAATTCTGGGCCGTTGAGATCAAGATCAGAGGATGATGATGAGGATGGTGGTGATGACGATGGGAGCAAGAAGAAGAAGAAAAGAAGGAAGTATCATAGACACACCGCTGAGCAGATCAGAGAAATGGAAGCGGTTTTCAAAGAATCTCCCCATCCAGATGAAAGCCAAAGGAAACAACTCAGCAAGCAATTAGGCCTTGCTCCAAGTCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAGTTCGTTGTTGAAGAAAGAAATAGAGAAATTAATGGAGGAAAATAAGGCCATGAGAGAGGCCATAAGCAAATCTTGTTGCCCTAACTGTGGCATGGCCATGGCCACCACTCCTACTATCACTGATGATAGCTCCACCATCTCCATTGAAGAACAACAACTTCGTTTAGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTACGAGAAGTTTCAGGGAAATACCCATCAGCTGGAACAATAATGTACCCTTCATGTTCTACTAGCCATGAGCAAGTAGATAATAATAGAATAAACTCATCAATGGATTTTTACAATGGAATTTTTGGGGTTGAAAAATCAAGGATAATGGAGATAGTGAACCAAGCAATAGAGGAACTCATAAAGATGGCTACTATTGGAGAACCTTTATGGGTACGTAGTGTTGAAACTGGTAGAGAAATACTCAACTATGATGAATATGAGAAGGTTTTTGAGGTTCACAATAATTCAAGAATTATTGGAAGAAGGTCAAACATGTCCATTGAAGCATCAAGAGAAAATGGAATTGTTTTTATGGATCTATCAAGTCTTGTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTAATATCAAAGGCTGCAAATGTTGATGTTATATGCAATGGAGAAGGATCTAATCGCAATGGTGTTGTTCAACTGATGTTTGCTGAGTTGCAAATGCTGACACCAATGGTGCCAACAAGAGAAGTATATTTCGTGAGATGCTGCAGAAAGTTAAGTGATGAAAAGTGGGGAATTGTTGATGTTTCCATAGACAAAGTAGAAGACAACATCGATGCTTCCCTTCTTAAATGCAGAAAACGCCCTTCTGGTTGCATTATTGAAGATAAGTCCCATGGTCATTGCAAGGTAAGTTGGGTGGAACACTGGGAATGCGAGAAAAGCAGTGTCCACAGAATGTATAGAAGCATTGTGAATAACGGTACAGCGTTTGGGGCAAGGCACTGGATATCAACACTGCAGCTTCAATGTCAACGTCTTGTTTTCTTCATGGCAACTAATGTTCCCATCAAGGATTCAACTGGTGTTGCCACATCAGCTGGAAGAAAGAGCATATTGAAGTTAGGAGAAAGAATGAGATGGAGTTTTTGCCATGCAATTGGAGCCTCAAGCTTCCATACATGGACAAAGGTGACAAGTAAAAATGGAGAAGACATTAGGATCAGTTCTAGGAAGAACTTGAATGATCCTGGTCAACCTCTTGGTGTCATCCTATCAGCTGTTTCTTCTGTGTGGCTTCCTCTCCCTCCAAATGTTCTTTTTCATTTCTTGAGGGATGAAAATCATAGGTCTCAGTGGGATATCATGGTCACTGGTGGGTCATCGGTGCAGTCCATAGCAACATTAGCCAAAGGCCAAGATCGGGGCAATGCTGTAAATATCCATGAGATTACATCAAAAGAAAACATCAAGTGGTGGATATTACAAGATAGCTCCACAAATGCTTATGAATCAATGGTAGTGTATGCTCCTGTGGACATTCCTAGCATGAAGAATGTGATGAATGGATGTGATTCAACCAACATTCCAATATTACCATCAGGGTTCTCAATTCTCCCTGATGGGGTTGATTCAAGGCCATTGATTACTTCAACTACTATGATGCAACAACAACAACAAGAAGAAAATATGAATACTGAAGAAGGAGGAGGGTCTTTGTTAACAATGGCATTCCAAGTAATTACTAATAATAATAGTAATGGTTCTCCATCATCAGCAAAATTGACTTTGGAGTCTGTGGAATCAGTCAAGAGTTTAGTTTCTTGTACATTAAGGAATATCAAATCATGTTTACAATGTGAAGAAGATTGA 2316 0.4041 MGMDMSSNTNKDLFSSPTLSLTLAGIFNNQVEEVGDEGSRECSRKEDTTTTTTVDVSSENSGPLRSRSEDDDEDGGDDDGSKKKKKRRKYHRHTAEQIREMEAVFKESPHPDESQRKQLSKQLGLAPSQVKFWFQNRRTQIKAIQERHESSLLKKEIEKLMEENKAMREAISKSCCPNCGMAMATTPTITDDSSTISIEEQQLRLENAKLKAEVEKLREVSGKYPSAGTIMYPSCSTSHEQVDNNRINSSMDFYNGIFGVEKSRIMEIVNQAIEELIKMATIGEPLWVRSVETGREILNYDEYEKVFEVHNNSRIIGRRSNMSIEASRENGIVFMDLSSLVQSFLDVNQWKEMFPCLISKAANVDVICNGEGSNRNGVVQLMFAELQMLTPMVPTREVYFVRCCRKLSDEKWGIVDVSIDKVEDNIDASLLKCRKRPSGCIIEDKSHGHCKVSWVEHWECEKSSVHRMYRSIVNNGTAFGARHWISTLQLQCQRLVFFMATNVPIKDSTGVATSAGRKSILKLGERMRWSFCHAIGASSFHTWTKVTSKNGEDIRISSRKNLNDPGQPLGVILSAVSSVWLPLPPNVLFHFLRDENHRSQWDIMVTGGSSVQSIATLAKGQDRGNAVNIHEITSKENIKWWILQDSSTNAYESMVVYAPVDIPSMKNVMNGCDSTNIPILPSGFSILPDGVDSRPLITSTTMMQQQQQEENMNTEEGGGSLLTMAFQVITNNNSNGSPSSAKLTLESVESVKSLVSCTLRNIKSCLQCEED 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00301 771 Pfam START domain 268 494 IPR002913 GO:0008289
Arst9g00301 771 MobiDBLite consensus disorder prediction 49 63 - -
Arst9g00301 771 FunFam Homeobox-leucine zipper protein GLABRA 2 267 493 - -
Arst9g00301 771 SUPERFAMILY Bet v1-like 261 494 - -
Arst9g00301 771 Gene3D - 273 494 IPR023393 -
Arst9g00301 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 83 766 IPR042160 -
Arst9g00301 771 CDD START_ArGLABRA2_like 262 493 - -
Arst9g00301 771 MobiDBLite consensus disorder prediction 31 97 - -
Arst9g00301 771 CDD homeodomain 91 142 IPR001356 GO:0003677
Arst9g00301 771 Coils Coil 198 220 - -
Arst9g00301 771 MobiDBLite consensus disorder prediction 34 48 - -
Arst9g00301 771 SUPERFAMILY Homeodomain-like 75 145 IPR009057 -
Arst9g00301 771 FunFam Homeobox-leucine zipper protein HDG1 72 160 - -
Arst9g00301 771 SMART START_1 267 494 IPR002913 GO:0008289
Arst9g00301 771 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Arst9g00301 771 Coils Coil 143 173 - -
Arst9g00301 771 Gene3D - 74 161 - -
Arst9g00301 771 SUPERFAMILY Bet v1-like 514 692 - -
Arst9g00301 771 ProSiteProfiles START domain profile. 258 497 IPR002913 GO:0008289
Arst9g00301 771 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Arst9g00301 771 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Arst9g00301 771 SMART HOX_1 86 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00301 Arst-Chr9 2595833 2609590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00301 56 770 Homeobox Transcription Factor Family AT1G79840 59.728 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst9g00301 START 2.1e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00301 K09338 - qsu:111988083 1007.28