Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00278 ATGTCTGGAAATCAAAATCACATGCACCCAACACTTCAAGGAGCCACAAGGTTTGGAGGGATTGCTGGAATTGTATCTGGTTATCCATTAGATACAATAAGGATAAGGCAACAAAGCTCAAACATTTTTGGTGGTTCATCATCATCAGCATTCAGTGTTCTTAGAAATGCTATTGCTAAGGAAGGACCAGCTTCTCTTTACCGTGGCATGGGTGCACCTTTGGCCTCTGTTACATTTCAGAATGCTGCAGTTTTCCAAACTTATGCAGTTCTCTCAAGAGTTTTTGACAAATCTGTTTCTCCCAAAGACCCTCCTTCCTATAAGGGTGTAGCATTAGGAGGAGTTGGCACTGGTGCTCTCCAGAGCATAATTCTTTCCCCAGTAGAGCTGATTAAGATTCGTCTTCAACTGCGCCGTGGTGCAAACCACTTGACAGAACCCCAAAAGGGTCCTGTTATGGTTGCCAAGAACATATGGAGAAAGGAAGGACTCACAGGAATCTACAGAGGACTAGGCATCACTGTGATAAGAGATGCACCTGCCCATGGTATCTATTTCTGGACATATGAATACGTAAGAGAACAGCTTCACCCAGGATGTAGAAGAAGTGGCCAAGAAAGCTTGACAACTATGTTAACAGCAGGTGGGTTAGCTGGGGTAACAAGCTGGATTTCTTGCTACCCTTTTGATGTTGTGAAAACAAGGTTACAGGCACAAACACCAGATTCTTTAAAATACAATGGCATTGTTGATTGCCTTAGAAAGAGTATTAAGGAAGAAGGGCATGCTGTTCTATGGCGTGGACTAGGAACTGCAGTTGCTAGAGCTTTTGTGGTGAATGGTGCTGTGTTTGCAGCATATGAGATAACACTAAGGTTATTGTTTAGTAATGGAAATATTCAAATGCAGGAAACTATATAA 921 0.4245 MSGNQNHMHPTLQGATRFGGIAGIVSGYPLDTIRIRQQSSNIFGGSSSSAFSVLRNAIAKEGPASLYRGMGAPLASVTFQNAAVFQTYAVLSRVFDKSVSPKDPPSYKGVALGGVGTGALQSIILSPVELIKIRLQLRRGANHLTEPQKGPVMVAKNIWRKEGLTGIYRGLGITVIRDAPAHGIYFWTYEYVREQLHPGCRRSGQESLTTMLTAGGLAGVTSWISCYPFDVVKTRLQAQTPDSLKYNGIVDCLRKSIKEEGHAVLWRGLGTAVARAFVVNGAVFAAYEITLRLLFSNGNIQMQETI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00278 306 PRINTS Mitochondrial carrier protein signature 25 39 IPR002067 GO:0055085
Arst9g00278 306 PRINTS Mitochondrial carrier protein signature 215 237 IPR002067 GO:0055085
Arst9g00278 306 PRINTS Mitochondrial carrier protein signature 168 186 IPR002067 GO:0055085
Arst9g00278 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 293 IPR018108 -
Arst9g00278 306 Pfam Mitochondrial carrier protein 207 297 IPR018108 -
Arst9g00278 306 Pfam Mitochondrial carrier protein 19 97 IPR018108 -
Arst9g00278 306 Pfam Mitochondrial carrier protein 112 196 IPR018108 -
Arst9g00278 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 195 IPR018108 -
Arst9g00278 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 94 IPR018108 -
Arst9g00278 306 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 17 294 - -
Arst9g00278 306 Gene3D Mitochondrial carrier domain 13 304 IPR023395 -
Arst9g00278 306 SUPERFAMILY Mitochondrial carrier 18 288 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00278 Arst-Chr9 2449000 2453732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00278 26 297 Antiporters AT1G79900 68.015 3.05e-134 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00278 K15109 - gmx:100812056 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00278 9 2449000 2453732 Arst9g00278 9 2449000 2453732 ECH