Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00262 ATGGATCATCGTCAAGTCTCGGTATTCATTTCCTTGTTATTAACACTTCATCTCTCATTATTAGGAGTAATTGCAACCAAATTCACATTGGTTAACAAATGTGATTACACAGTGTGGCCGGGAATATATTCTAACGCCGGAGTCTCCCCTCTCTCCACCACCGGCTTCGTCCTCCAACCCGGCCAGTCCGCTCCAGTCACCGCCGCAGCTGGCTGGAGCGGCCGCTTCTGGGGCCGAACCCTCTGCTCCCAAAACTCCACAGGAAAATTCTCCTGCGTCACTGGCGACTGCGGCTCAGGAAAGCTTGAGTGCTCCGGCAACGGCGCCACGGTGGCCACGCTGGCCGAGTTCACACTTGGCAGCGTTGGCGGCCTCGATTTTTTCGACGTCAGCCTCGTCGACGGCTACAACGTCCCCATGCTGGTGGCACCCAGCGGCGGATCCGGCGCCGGAAACTGCACCGCCACGGGATGCGTTGGAGATTTGATCGGCGCGTGTCCTTCGGAGCTGAGGGTTATGAGTGAGGATGGAAAACAAGGAGTCGCGTGTAAAAGCGCGTGTCAAGCGTTCCGTTCGCCTCAATATTGCTGCACCGGCGCGTATCTGACGCCGAAGACTTGCAAGCCATCGAGTTACTCGCGAATATTCAAGAGCGTTTGCCCACGCGCCTATACCTACGCGTACGACGACGAGACCAGCACGTTTACTTGCGCGAATGCCGATTACACAATTACCTTTTGCCCTGCCCCTAGTACAAGCACTACAAAAGCTGATGATATTGGTGTTTACTGGGGCCAAAATAGTGATGAGGGAACTCTTGCTAATACATGTGAATCAAGAAAGTACTCCTATGTAAACATAGCATTCCTTACCACATTTGGAAATGGTGAAACCCCGGTACTAAACCTGGCAGGTCATTGTAATCCTTCTTCAAAAGGGTGCACTGTTCTTAGCTTAGATATCAAAAGTTGCCAGAAGCAAGGGATCAAGGTTATGCTCTCGATCGGAGGAGTATCCAGTACATCCCAATTGACTTCTTCTAAAGATGCTAAAAATGTTTCTGATTATCTCTGGAACAATTTCTTGGGTGGTAACTCATCTTCGCGCCCTTTTGGGGACGCAGTGTTAGATGGGATAGAATTCAACCCAGGTGATAATGGATACTCAATATACTGGATGGACCTTGCGCGTTACCTCAAGTCCAACTCAACACAAAATGTTTCTATAGGTGCAGCTCCTCAATGCCCCCTTGTTAGTGCTGAGAACTCTACCTTTAGTAGTGGATATTTCGATTATCTTTCGGTACAATTCTACAACAATCCTCCATGCAATTTTGTGAGTGGCAATACTAGTGGCTTCATAAATGCATGGCACCAATGGAGCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGGCAGCATCTTCTGATGAAGCTGCAATATTTCTGGGGTTGCCAGCATCTTCTGATGAAGCTGCATCTGGCTATATTCCTGCAAATTTGTTAATTTCTCAGGTCCTTCCTATCGTAAGGAACTCATCTAATTATGGAGGCATAATGTTGTGGGACAGATACAGCGATGTTAAGAGCAGATATAGTGATTTCATCGAATTCAATACAGGAGCGCAAGCATCCACACCTGCCGAAAGGAACAAAACCCACAAAGAAGGGAAAGCACCCATTCCTGTGGAAAGCATCAAACCTCATGCAGGAAATGGAAAACGCCATCTAGTGGATACAAGAAACAGGCAAAGGAAGCTAATACATGACATTGGAGGTGCTGCAATGCTTTCCAGGATGAATTACATAGCAAAAAAGTTTAAAAGAGAGGCTAATGCAGGCGATGAGATTGAAATATTCAGTTTTGAAAGCATGGTCGCTGCTACAAACAATTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTAGATTGACAAACCAACAAGAAATTGCGATAAAGCGACTCTCTAAGAGTTCGGGGCAAGGGTTAACAGAGTTTAAGAATGAAGCTAAACTCATTGCAAAACTGCAGCACACTAATCTTGTGAAGCTTATTGGGCTCTGCATCCAAAGAGAAGAGAGAATGTTGGTCTATGAGTACATGTCCAACAGAAGCTTAGACTTGCACTTATTTGATGCTGAAAGAAGGAATGTTTTGGATTGGGAAAAGCGGCTTAACATCATAGAAGGCATTGCTCAAGGACTATTATATCTTCACAAGTATTCAAGGCTAAAAGTGATTCATCGTGATTTGAAAGCCGGCAACATCTTACTTGACGATGAGATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCTGAAGAAAAAACAAACCGAATTGTTGGAACACATGGTTACATGTCTCCAGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGACGTTTTCAGCTTTGGCGTATTGCTGCTAGAGATTCTCAGTGCAAAAAAGAATAACTCCTCTTACAACCCTGATTTTCCACTACTCAATCTAATTGGACATGCATGGAAGTTATGGAATGAAGGTAAAGCTTTAGAGCTAATGGACCATGGATTAAATGAAACATGCAACACTAAAGAAGTATTGAGATGTATCCACATTGGCCTATTGTGTGTGCAAAACGTTCCAACAGATAGACCCACCATGGTTGATGTTGTCTCTTTTTTGTCAAATGATGCTATTCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATACTAACACAAAAGAAATTTTCTCCAAAAATAGTTTAACATTATCTGATGTGGATGGCAGATGA 2856 0.4447 MDHRQVSVFISLLLTLHLSLLGVIATKFTLVNKCDYTVWPGIYSNAGVSPLSTTGFVLQPGQSAPVTAAAGWSGRFWGRTLCSQNSTGKFSCVTGDCGSGKLECSGNGATVATLAEFTLGSVGGLDFFDVSLVDGYNVPMLVAPSGGSGAGNCTATGCVGDLIGACPSELRVMSEDGKQGVACKSACQAFRSPQYCCTGAYLTPKTCKPSSYSRIFKSVCPRAYTYAYDDETSTFTCANADYTITFCPAPSTSTTKADDIGVYWGQNSDEGTLANTCESRKYSYVNIAFLTTFGNGETPVLNLAGHCNPSSKGCTVLSLDIKSCQKQGIKVMLSIGGVSSTSQLTSSKDAKNVSDYLWNNFLGGNSSSRPFGDAVLDGIEFNPGDNGYSIYWMDLARYLKSNSTQNVSIGAAPQCPLVSAENSTFSSGYFDYLSVQFYNNPPCNFVSGNTSGFINAWHQWSNLKVKKIFLGLAASSDEAAIFLGLPASSDEAASGYIPANLLISQVLPIVRNSSNYGGIMLWDRYSDVKSRYSDFIEFNTGAQASTPAERNKTHKEGKAPIPVESIKPHAGNGKRHLVDTRNRQRKLIHDIGGAAMLSRMNYIAKKFKREANAGDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGRLTNQQEIAIKRLSKSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNRSLDLHLFDAERRNVLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKAGNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSAKKNNSSYNPDFPLLNLIGHAWKLWNEGKALELMDHGLNETCNTKEVLRCIHIGLLCVQNVPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHTNTKEIFSKNSLTLSDVDGR 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00262 951 Pfam Thaumatin family 32 248 IPR001938 -
Arst9g00262 951 ProSiteProfiles Thaumatin family profile. 25 248 IPR001938 -
Arst9g00262 951 Pfam Glycosyl hydrolases family 18 260 527 IPR001223 GO:0005975
Arst9g00262 951 SUPERFAMILY Osmotin, thaumatin-like protein 27 248 IPR037176 -
Arst9g00262 951 Gene3D Transferase(Phosphotransferase) domain 1 708 919 - -
Arst9g00262 951 CDD STKc_IRAK 638 904 - -
Arst9g00262 951 CDD TLP-PA 27 247 - -
Arst9g00262 951 SMART serkin_6 632 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00262 951 SUPERFAMILY (Trans)glycosidases 259 535 IPR017853 -
Arst9g00262 951 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Arst9g00262 951 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Arst9g00262 951 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Arst9g00262 951 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Arst9g00262 951 ProSiteProfiles Protein kinase domain profile. 632 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00262 951 MobiDBLite consensus disorder prediction 544 576 - -
Arst9g00262 951 Gene3D Thaumatin 26 248 IPR037176 -
Arst9g00262 951 Gene3D Phosphorylase Kinase; domain 1 605 707 - -
Arst9g00262 951 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 258 543 IPR001223 GO:0005975
Arst9g00262 951 Pfam Protein tyrosine and serine/threonine kinase 635 904 IPR001245 GO:0004672|GO:0006468
Arst9g00262 951 CDD GH18_hevamine_XipI_class_III 259 536 IPR045321 -
Arst9g00262 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Arst9g00262 951 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Arst9g00262 951 Gene3D Glycosidases 259 539 - -
Arst9g00262 951 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 368 945 - -
Arst9g00262 951 SMART tha2 28 248 IPR001938 -
Arst9g00262 951 FunFam THAUMATIN-LIKE PROTEIN 1 26 248 - -
Arst9g00262 951 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 708 912 - -
Arst9g00262 951 SUPERFAMILY Protein kinase-like (PK-like) 615 936 IPR011009 -
Arst9g00262 951 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00262 Arst-Chr9 2195885 2208101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00262 610 919 Receptor kinase-like Gene Family AT4G11530 55.238 2.60e-114 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g00262 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00262 - - aip:107617580 1797.71