Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00261 ATGGATCATCGTCAAGTCTCGGTATTCATTTCCTTGTTATTAACACTTCATCTCTCATTATTAGGAGTAATTGCAACCAAATTCACATTGGTTAACAAATGTGATTACACAGTGTGGCCGGGAATATATTCTAACGCCGGAGTCTCCCCTCTCTCCACCACCGGCTTCGTCCTCCAACCCGGCCAGTCCGCTCCAGTCACCGCCGCAGCTGGCTGGAGCGGCCGCTTCTGGGGCCGAACCCTCTGCTCCCAAAACTCCACAGGAAAATTCTCCTGCGTCACTGGCGACTGCGGCTCAGGAAAGCTTGAGTGCTCCGGCAACGGCGCCACGGTGGCCACGCTGGCCGAGTTCACACTTGGCAGCGTTGGCGGCCTCGATTTTTTCGACGTCAGCCTCGTCGACGGCTACAACGTCCCCATGCTGGTGGCACCCAGCGGCGGATCCGGCGCCGGAAACTGCACCGCCACGGGATGCGTTGGAGATTTGATCGGCGCGTGTCCTTCGGAGCTGAGGGTTATGAGTGAGGATGGAAAACAAGGAGTCGCGTGTAAAAGCGCGTGTCAAGCGTTCCGTTCGCCTCAATATTGCTGCACCGGCGCGTATCTGACGCCGAAGACTTGCAAGCCATCGAGTTACTCGCGAATATTCAAGAGCGTTTGCCCACGCGCCTATACCTACGCGTACGACGACGAGACCAGCACGTTTACTTGCGCGAATGCCGATTACACAATTACCTTTTGCCCTGCCCCTAGTACAAGCACTACAAAAGCTGATGATATTGGTGTTTACTGGGGCCAAAATAGTGATGAGGGAACTCTTGCTAATACATGTGAATCAAGAAAGTACTCCTATGTAAACATAGCATTCCTTACCACATTTGGAAATGGTGAAACCCCGGTACTAAACCTGGCAGGTCATTGTAATCCTTCTTCAAAAGGGTGCACTGTTCTTAGCTTAGATATCAAAAGTTGCCAGAAGCAAGGGATCAAGGTTATGCTCTCGATCGGAGGAGTATCCAGTACATCCCAATTGACTTCTTCTAAAGATGCTAAAAATGTTTCTGATTATCTCTGGAACAATTTCTTGGGTGGTAACTCATCTTCGCGCCCTTTTGGGGACGCAGTGTTAGATGGGATAGAATTCAACCCAGGTGATAATGGATACTCAATATACTGGATGGACCTTGCGCGTTACCTCAAGTCCAACTCAACACAAAATGTTTCTATAGGTGCAGCTCCTCAATGCCCCCTTGTTAGTGCTGAGAACTCTACCTTTAGTAGTGGATATTTCGATTATCTTTCGGTACAATTCTACAACAATCCTCCATGCAATTTTGTGAGTGGCAATACTAGTGGCTTCATAAATGCATGGCACCAATGGAGCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGGCAGCATCTTCTGATGAAGCTGCAATATTTCTGGGGTTGCCAGCATCTTCTGATGAAGCTGCATCTGGCTATATTCCTGCAAATTTGTTAATTTCTCAGGTCCTTCCTATCGTAAGGAACTCATCTAATTATGGAGGCATAATGTTGTGGGACAGATACAGCGATGTTAAGAGCAGATATAGTGATTTCATCGAATTCAATACAGGAGCGCAAGCATCCACACCTGCCGAAAGGAACAAAACCCACAAAGAAGGGAAAGCACCCATTCCTGTGGAAAGCATCAAACCTCATGCAGGAAATGGAAAACGCCATCTAGTTATTGGCGTGGGATCTGCCATTACAATATGTTTAATTTGCTACTTGAGCTGTGTATGTTGGAGGAAGTACAAAGCAGAAGTGGATACAAGAAACAGGCAAAGGAAGCTAATACATGACATTGGAGGTGCTGCAATGCTTTCCAGGATGAATTACATAGCAAAAAAGTTTAAAAGAGAGGCTAATGCAGGCGATGAGATTGAAATATTCAGTTTTGAAAGCATGGTCGCTGCTACAAACAATTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTAGATTGACAAACCAACAAGAAATTGCGATAAAGCGACTCTCTAAGAGTTCGGGGCAAGGGTTAACAGAGTTTAAGAATGAAGCTAAACTCATTGCAAAACTGCAGCACACTAATCTTGTGAAGCTTATTGGGCTCTGCATCCAAAGAGAAGAGAGAATGTTGGTCTATGAGTACATGTCCAACAGAAGCTTAGACTTGCACTTATTTGATGCTGAAAGAAGGAATGTTTTGGATTGGGAAAAGCGGCTTAACATCATAGAAGGCATTGCTCAAGGACTATTATATCTTCACAAGTATTCAAGGCTAAAAGTGATTCATCGTGATTTGAAAGCCGGCAACATCTTACTTGACGATGAGATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCTGAAGAAAAAACAAACCGAATTGTTGGAACACATGGTTACATGTCTCCAGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGACGTTTTCAGCTTTGGCGTATTGCTGCTAGAGATTCTCAGTGCAAAAAAGAATAACTCCTCTTACAACCCTGATTTTCCACTACTCAATCTAATTGGACATGCATGGAAGTTATGGAATGAAGGTAAAGCTTTAGAGCTAATGGACCATGGATTAAATGAAACATGCAACACTAAAGAAGTATTGAGATGTATCCACATTGGCCTATTGTGTGTGCAAAACGTTCCAACAGATAGACCCACCATGGTTGATGTTGTCTCTTTTTTGTCAAATGATGCTATTCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATACTAACACAAAAGAAATTTTCTCCAAAAATAGTTTAACATTATCTGATGTGGATGGCAGATGA 2937 0.4433 MDHRQVSVFISLLLTLHLSLLGVIATKFTLVNKCDYTVWPGIYSNAGVSPLSTTGFVLQPGQSAPVTAAAGWSGRFWGRTLCSQNSTGKFSCVTGDCGSGKLECSGNGATVATLAEFTLGSVGGLDFFDVSLVDGYNVPMLVAPSGGSGAGNCTATGCVGDLIGACPSELRVMSEDGKQGVACKSACQAFRSPQYCCTGAYLTPKTCKPSSYSRIFKSVCPRAYTYAYDDETSTFTCANADYTITFCPAPSTSTTKADDIGVYWGQNSDEGTLANTCESRKYSYVNIAFLTTFGNGETPVLNLAGHCNPSSKGCTVLSLDIKSCQKQGIKVMLSIGGVSSTSQLTSSKDAKNVSDYLWNNFLGGNSSSRPFGDAVLDGIEFNPGDNGYSIYWMDLARYLKSNSTQNVSIGAAPQCPLVSAENSTFSSGYFDYLSVQFYNNPPCNFVSGNTSGFINAWHQWSNLKVKKIFLGLAASSDEAAIFLGLPASSDEAASGYIPANLLISQVLPIVRNSSNYGGIMLWDRYSDVKSRYSDFIEFNTGAQASTPAERNKTHKEGKAPIPVESIKPHAGNGKRHLVIGVGSAITICLICYLSCVCWRKYKAEVDTRNRQRKLIHDIGGAAMLSRMNYIAKKFKREANAGDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGRLTNQQEIAIKRLSKSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNRSLDLHLFDAERRNVLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKAGNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSAKKNNSSYNPDFPLLNLIGHAWKLWNEGKALELMDHGLNETCNTKEVLRCIHIGLLCVQNVPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHTNTKEIFSKNSLTLSDVDGR 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00261 978 Pfam Protein tyrosine and serine/threonine kinase 662 931 IPR001245 GO:0004672|GO:0006468
Arst9g00261 978 Gene3D Glycosidases 259 539 - -
Arst9g00261 978 ProSiteProfiles Thaumatin family profile. 25 248 IPR001938 -
Arst9g00261 978 FunFam THAUMATIN-LIKE PROTEIN 1 26 248 - -
Arst9g00261 978 Gene3D Thaumatin 26 248 IPR037176 -
Arst9g00261 978 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 624 734 - -
Arst9g00261 978 MobiDBLite consensus disorder prediction 546 565 - -
Arst9g00261 978 CDD TLP-PA 27 247 - -
Arst9g00261 978 Pfam Thaumatin family 32 248 IPR001938 -
Arst9g00261 978 Pfam Glycosyl hydrolases family 18 260 527 IPR001223 GO:0005975
Arst9g00261 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Arst9g00261 978 Gene3D Transferase(Phosphotransferase) domain 1 735 946 - -
Arst9g00261 978 CDD STKc_IRAK 665 931 - -
Arst9g00261 978 Gene3D Phosphorylase Kinase; domain 1 632 734 - -
Arst9g00261 978 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 258 543 IPR001223 GO:0005975
Arst9g00261 978 SUPERFAMILY Protein kinase-like (PK-like) 642 963 IPR011009 -
Arst9g00261 978 CDD GH18_hevamine_XipI_class_III 259 536 IPR045321 -
Arst9g00261 978 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 355 972 - -
Arst9g00261 978 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Arst9g00261 978 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Arst9g00261 978 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Arst9g00261 978 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Arst9g00261 978 SUPERFAMILY (Trans)glycosidases 259 535 IPR017853 -
Arst9g00261 978 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Arst9g00261 978 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 735 939 - -
Arst9g00261 978 SUPERFAMILY Osmotin, thaumatin-like protein 27 248 IPR037176 -
Arst9g00261 978 SMART tha2 28 248 IPR001938 -
Arst9g00261 978 ProSiteProfiles Protein kinase domain profile. 659 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00261 978 SMART serkin_6 659 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00261 Arst-Chr9 2195885 2208101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00261 637 946 Receptor kinase-like Gene Family AT4G11530 55.238 7.74e-114 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g00261 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00261 - - aip:107617580 1864.74