Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00239 ATGGGCGTGAATTCCACCACCACCGTCAACAAAATCCAATCGGAATTACCGATGTCAGTGGCATCTTCGCCGTTGGAGATCCACAACGTGCGGTTGCCGCCGCGGCGAAGCACCTCACAGAAGCTGAGGCAGAGGCTCTCAGACATATTCTTCCCGGACGATCCACTTCACCGGTTCAAGAACCAACCGTCATGGCTGGTGAAGCTCATGCTCGGTGTTCAGTGCATGTTCCCTATCTTCCAGTGGGGCCCAACCTATAACCTTTCCCTTTTTCGTTCTGACGTCATCTCTGGCCTCACCATTGCTAGTCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCCTGCTTGGAAGCTCTAAACATCTTGGTGTTGGTCCAGTCTCAATTGCATCTTTGGTGATGGGATCAATGTTAAGTGAAACAGTTTCTTATACACAAGATCCAATTCTTTATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTCTTCCAATCTTCTTTGGGAATATTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTAGGATTCATGGCTGGTGCAGCCATAATTGTATCTTTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTGCACTTCACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCGGTTTTCAAACAAAAAGAGGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGCTTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCTTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACAATTTTAGTCTTTCTCCTAAGAAACAAGGCTCATGGAATTGCAATTATTGGTGAATTGCCAAAAGGCCTTAATCCACCATCATCAAACATGTTATTCTTTAGTGGCCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTTACTGGGATCTTGTCTCTAACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCAATTGGTATCATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAGCAGTCTCAAATATAATCATGGCCTCAGCAGTTCTTGTGACTCTTCTGTTTCTAATGCCACTATTCTATTACACGCCAAACGTCGTCTTAGCAGCGATTATCATCACTGCTGTGATTGGCCTAATAGATTACCAAGCTTCATATAAGCTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATTGCGGTGGCAATATCAGTGTTCAAGATATTGCTTCATGTCTCAAGACCAAACACATTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACCTTCAAGAAAGGATTTTGAGATGGGTTAGAGAAGAGGAAGAGCATATCAAAGCAAACAATGGAAGTAAATTGGAGTGCATAATTTTGGACATGACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTGATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA 1962 0.4281 MGVNSTTTVNKIQSELPMSVASSPLEIHNVRLPPRRSTSQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCMFPIFQWGPTYNLSLFRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIIPVLASVFKQKEEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIAIIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQASYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLEKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00239 653 NCBIfam sulfate permease 78 641 IPR001902 GO:0016020|GO:0055085
Arst9g00239 653 ProSiteProfiles STAS domain profile. 522 645 IPR002645 -
Arst9g00239 653 PANTHER SULFATE TRANSPORTER 37 645 IPR001902 GO:0016020|GO:0055085
Arst9g00239 653 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Arst9g00239 653 SUPERFAMILY SpoIIaa-like 527 644 IPR036513 -
Arst9g00239 653 CDD STAS_SulP_like_sulfate_transporter 523 638 - -
Arst9g00239 653 FunFam Sulfate transporter 31 502 648 - -
Arst9g00239 653 Pfam STAS domain 523 641 IPR002645 -
Arst9g00239 653 Gene3D STAS domain 502 647 IPR036513 -
Arst9g00239 653 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00239 Arst-Chr9 2010216 2015556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00239 4 653 Inorganic Solute Cotransporters AT3G15990 75.307 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00239 K17471 - gmx:100780331 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00239 9 2010216 2015556 Arst9g00239 9 2010216 2015556 ECH
Arst7g03177 7 77828218 77831782 Arst9g00239 9 2010216 2015556 PCT