Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00222 ATGGATATCACCGACACGCAACGGAATAGTAACACTGAAAGTGATCTATGTCCATTGCTGATGGAGCAGCTGGTATCCCGCAATGATCATCAGCACATAATTGATATTGCAAGGAACAATGATGGTTTATCCAACTCATCTAATAATCAACGCCCTGCAGTGCATGAAAATCAACCTAGTGTCAGCACGGATGTCCATACCCGTGAAACAGCTTCATTTGCTTCACCTAGATTTAGTCCTAGAAGTTCCACATTGACAAGAGGAGAGGGGTACAATCATCGCAGAAGGAGCCCACTAAATTCTGGTCTATGGGTCTCTGTTGAGCTTTTTGTCACTGTGGGTCAGATCATAGCATCTGTTGTTGTCTTGTCAATGTCAAGAGATGAACATCCCCAAGCCCCATTGTTCGCATGGATTGTGGGTTATGCAGCTGGTTGTGTTGCTACTCTTCCTATTCTTTACTGGCGATATCAAAACTATAATCAAATTGCGGAACCAGATATATCTCAATCATCTCAAGGATCTTCTTTAAGTAACCCTTCAGAAACTACTTATACTGCCATATCTGTTACCCATAATTCGAACAGCGACAATAGTCACACTACAGAATTGTCTGCAGGAAGTGCTAGAATTCCTGCAGTGTTTAGTTCTAGGTTTAATGGATTAGTAGACCATTTCAAGATGGCCTTGGATTGCTTCTTTGCAGTTTGGTTTGTCGTTGGCAATGTGTGGATCTTTGGAGGTCACACTTCTCCTTCCGATGCTCCAAAATTGTATAGGTTATGTATAGTCTTCCTTACCTTCAGCTGCATCGTTAGTGGTGTTGAGGATGTCAATACCACTGCTGAAGATGACGGTGGAATTTTAGCTGCTGGGACTGAAAAGGAACGGCCTATATCAGGAGAAGATTCTGCTTGCTGCATTTGCTTGGCAAAATATGTAGACAACGACGAACTTCGGGAGCTACCATGCTTTCATATCTTTCATGTAGGGTGTATTGATAAATGGTTAAAGATAAATGCATCCTGTCCTCTTTGTAAATATGAAGTTGGTACAAACAATGAAGGTGCACATTCGGCCATGGGTTCCAATCAGCATTAG 1101 0.4214 MDITDTQRNSNTESDLCPLLMEQLVSRNDHQHIIDIARNNDGLSNSSNNQRPAVHENQPSVSTDVHTRETASFASPRFSPRSSTLTRGEGYNHRRRSPLNSGLWVSVELFVTVGQIIASVVVLSMSRDEHPQAPLFAWIVGYAAGCVATLPILYWRYQNYNQIAEPDISQSSQGSSLSNPSETTYTAISVTHNSNSDNSHTTELSAGSARIPAVFSSRFNGLVDHFKMALDCFFAVWFVVGNVWIFGGHTSPSDAPKLYRLCIVFLTFSCIGXSGVEDVNTTAEDDGGILAAGTEKERPISGEDSACCICLAKYVDNDELRELPCFHIFHVGCIDKWLKINASCPLCKYEVGTNNEGAHSAMGSNQH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00222 367 ProSiteProfiles Zinc finger RING-type profile. 307 348 IPR001841 -
Arst9g00222 367 SMART ring_2 307 347 IPR001841 -
Arst9g00222 367 MobiDBLite consensus disorder prediction 32 93 - -
Arst9g00222 367 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 272 - -
Arst9g00222 367 MobiDBLite consensus disorder prediction 38 87 - -
Arst9g00222 367 SUPERFAMILY RING/U-box 302 353 - -
Arst9g00222 367 CDD RING-H2_RNF6-like 307 348 - -
Arst9g00222 367 Pfam Ring finger domain 306 348 IPR001841 -
Arst9g00222 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 357 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00222 Arst-Chr9 1820468 1824163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00222 1 352 C3H Transcription Factor Family AT1G80400 45.610 2.17e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00222 - - aip:107614650 703.745