Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00203 ATGAAAGAAAATAGTGTCACTTTGAAAGCTGGAGAGCTCCCTTGTCGATTGACTCGTGCTCGAGCTGCTGCATTTCGTGCATCAGGACAGCTTCCACCAGTGAAGGAACCAGCAAAGCAGCAGAATCAGAAGCAGCCGCAGCTGCGAGCCAATCCAAAAAGAGCAGTTTCTGATAATGCTTGTCTTCAGCGCAAGAAGAGAGCTGTTCTTCAGGATGTTACTAATGTTTTCTGTGAGAATACTTACAGGAGCTGTTTCAATTCAACTAAAATTCAGGGTAAGAAGAGCAAGCTGGCAATGGCTAGTCGAATCAATGTTTCCAAAGTGGCGCCTTCTGCTGCTGCGCAGCAACATGTTCGAGTTCACTGCAAAACAAAGAGTTTTCCGGAGCCAGCCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGGGATCCAGAGATTGCTAACATAGATGATGATAATGAAGATCCTCAGTTGTGCAGCCTCTATGCTGCTGATATCTACAACACCTTGCGAGTTTATGAGCTCGCAAGAAGGCCGAATCCTAACTTTATGGACACAAAGCAGCACGACATTACTCAAAGCATGCGCGGGATACTGGTCGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGACTAGACACTCTTTATCTCACTGTGTATCTCATAGATTGGTTTCTCTCCAGAAATTACATAGAAAGACAGAGACTTCAGCTACTTGGGATCACATGCATGTTAATCGCCTCGAAGTATGAAGAAATTAATGCCCCACGAATCGAAGATTTTTGCTACATCACAGACAACACATACACGAAAGTGGAGGTACTGAAAATGGAGAGCCAAGTGTTGAAATCTTCTGGATATCAGCTTTTTGCTCCCACTACAATAAGTTTCCTCAGGAGGTTTCTTCAAGCTGCTCAAGCATCATCCAAGAGTCCGAGCCTTGAATTGGAGTACTTGGCCAACTATCTAGCTGAACTAACATTGATGGAATATAGTTTCTTGAATTTCCTTCCATCTACCATTGCTGCATCAGCTGTGTTCCTTGCCAAATGGACATTGGATCAGTCAAAACATCCATGGAATCCAACTCTTCAGCACTATGCTTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGATCTGCAGTTGAATATCAATGGATGCCCTCTAACTGCGATTCGCTCGAAGTACAGTCAAGACAAGTTTAAATGTGTAGGGTCCTTGTCTCCACCAAAACTACCTGAAACTATGTTCTGA 1278 0.4335 MKENSVTLKAGELPCRLTRARAAAFRASGQLPPVKEPAKQQNQKQPQLRANPKRAVSDNACLQRKKRAVLQDVTNVFCENTYRSCFNSTKIQGKKSKLAMASRINVSKVAPSAAAQQHVRVHCKTKSFPEPAKKCSPFPIALRDPEIANIDDDNEDPQLCSLYAADIYNTLRVYELARRPNPNFMDTKQHDITQSMRGILVDWLVEVSEEYRLGLDTLYLTVYLIDWFLSRNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCYITDNTYTKVEVLKMESQVLKSSGYQLFAPTTISFLRRFLQAAQASSKSPSLELEYLANYLAELTLMEYSFLNFLPSTIAASAVFLAKWTLDQSKHPWNPTLQHYACYKASDLKTTVLALQDLQLNINGCPLTAIRSKYSQDKFKCVGSLSPPKLPETMF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00203 425 SMART cyclin_7 299 387 IPR013763 -
Arst9g00203 425 SMART cyclin_7 202 286 IPR013763 -
Arst9g00203 425 FunFam Mitotic cyclin 6 180 280 - -
Arst9g00203 425 Pfam Cyclin, C-terminal domain 295 417 IPR004367 -
Arst9g00203 425 Pfam Cyclin, N-terminal domain 166 287 IPR006671 -
Arst9g00203 425 MobiDBLite consensus disorder prediction 27 56 - -
Arst9g00203 425 MobiDBLite consensus disorder prediction 35 52 - -
Arst9g00203 425 FunFam Cyclin A1 282 414 - -
Arst9g00203 425 SUPERFAMILY Cyclin-like 295 419 IPR036915 -
Arst9g00203 425 Gene3D - 166 413 - -
Arst9g00203 425 SUPERFAMILY Cyclin-like 155 291 IPR036915 -
Arst9g00203 425 PANTHER CYCLINS 117 406 IPR039361 -
Arst9g00203 425 CDD CYCLIN_AtCycA-like_rpt2 295 409 - -
Arst9g00203 425 Gene3D - 180 293 - -
Arst9g00203 425 PIRSF Cyclin_A_B_D_E 33 424 IPR046965 GO:0016538|GO:0044772
Arst9g00203 425 SMART Cyclin_C_2 295 418 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00203 Arst-Chr9 1532005 1537396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00203 2 425 Core Cell Cycle Gene Families AT1G80370 54.267 2.12e-162 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00203 K06627 - gmx:100793657 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00203 9 1532005 1537396 Arst9g00203 9 1532005 1537396 ECH