Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00202 ATGAAAGAAAATAGTGTCACTTTGAAAGCTGGAGAGCTCCCTTGTCGATTGACTCGTGCTCGAGCTGCTGCATTTCGTGCATCAGGACAGCTTCCACCAGTGAAGGAACCAGCAAAGCAGCAGAATCAGAAGCAGCCGCAGCTGCGAGCCAATCCAAAAAGAGCAGTTTCTGATAATGCTTGTCTTCAGCGCAAGAAGAGAGCTGTTCTTCAGGATGTTACTAATGTTTTCTGTGAGAATACTTACAGGAGCTGTTTCAATTCAACTAAAATTCAGGGTAAGAAGAGCAAGCTGGCAATGGCTAGTCGAATCAATGTTTCCAAAGTGGCGCCTTCTGCTGCTGCGCAGCAACATGTTCGAGTTCACTGCAAAACAAAGAGTTTTCCGGAGCCAGGTCTTAAATCAGAAGATGCATCTTGTTCAATTAATTCAGAAAACAATGCACTCATTAGGCTAAGTGTGAAAGAGAGTGGCAAGGATGATAAAACTCATGCCTCAGGAATCTCTCCTCTGCCTTTGATTTCGCAGAAGAAAGCCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGGGATCCAGAGATTGCTAACATAGATGATGATAATGAAGATCCTCAGTTGTGCAGCCTCTATGCTGCTGATATCTACAACACCTTGCGAGTTTATGAGCTCGCAAGAAGGCCGAATCCTAACTTTATGGACACAAAGCAGCACGACATTACTCAAAGCATGCGCGGGATACTGGTCGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGACTAGACACTCTTTATCTCACTGTGTATCTCATAGATTGGTTTCTCTCCAGAAATTACATAGAAAGACAGAGACTTCAGCTACTTGGGATCACATGCATGTTAATCGCCTCGAAGTATGAAGAAATTAATGCCCCACGAATCGAAGATTTTTGCTACATCACAGACAACACATACACGAAAGTGGAGGTACTGAAAATGGAGAGCCAAGTGTTGAAATCTTCTGGATATCAGCTTTTTGCTCCCACTACAATAAGTTTCCTCAGGAGGTTTCTTCAAGCTGCTCAAGCATCATCCAAGAGTCCGAGCCTTGAATTGGAGTACTTGGCCAACTATCTAGCTGAACTAACATTGATGGAATATAGTTTCTTGAATTTCCTTCCATCTACCATTGCTGCATCAGCTGTGTTCCTTGCCAAATGGACATTGGATCAGTCAAAACATCCATGGAATCCAACTCTTCAGCACTATGCTTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGATCTGCAGTTGAATATCAATGGATGCCCTCTAACTGCGATTCGCTCGAAGTACAGTCAAGACAAGTTTAAATGTGTAGGGTCCTTGTCTCCACCAAAACTACCTGAAACTATGTTCTGA 1419 0.4292 MKENSVTLKAGELPCRLTRARAAAFRASGQLPPVKEPAKQQNQKQPQLRANPKRAVSDNACLQRKKRAVLQDVTNVFCENTYRSCFNSTKIQGKKSKLAMASRINVSKVAPSAAAQQHVRVHCKTKSFPEPGLKSEDASCSINSENNALIRLSVKESGKDDKTHASGISPLPLISQKKAKKCSPFPIALRDPEIANIDDDNEDPQLCSLYAADIYNTLRVYELARRPNPNFMDTKQHDITQSMRGILVDWLVEVSEEYRLGLDTLYLTVYLIDWFLSRNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCYITDNTYTKVEVLKMESQVLKSSGYQLFAPTTISFLRRFLQAAQASSKSPSLELEYLANYLAELTLMEYSFLNFLPSTIAASAVFLAKWTLDQSKHPWNPTLQHYACYKASDLKTTVLALQDLQLNINGCPLTAIRSKYSQDKFKCVGSLSPPKLPETMF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00202 472 SMART Cyclin_C_2 342 465 IPR004367 -
Arst9g00202 472 Pfam Cyclin, C-terminal domain 342 464 IPR004367 -
Arst9g00202 472 Gene3D - 227 340 - -
Arst9g00202 472 MobiDBLite consensus disorder prediction 27 56 - -
Arst9g00202 472 CDD CYCLIN_AtCycA_like_rpt1 203 338 - -
Arst9g00202 472 MobiDBLite consensus disorder prediction 35 52 - -
Arst9g00202 472 SMART cyclin_7 249 333 IPR013763 -
Arst9g00202 472 SMART cyclin_7 346 434 IPR013763 -
Arst9g00202 472 CDD CYCLIN_AtCycA-like_rpt2 342 456 - -
Arst9g00202 472 FunFam Cyclin A1 329 461 - -
Arst9g00202 472 Pfam Cyclin, N-terminal domain 213 334 IPR006671 -
Arst9g00202 472 FunFam Mitotic cyclin 6 227 327 - -
Arst9g00202 472 PANTHER CYCLINS 160 453 IPR039361 -
Arst9g00202 472 SUPERFAMILY Cyclin-like 202 338 IPR036915 -
Arst9g00202 472 SUPERFAMILY Cyclin-like 342 466 IPR036915 -
Arst9g00202 472 PIRSF Cyclin_A_B_D_E 21 471 IPR046965 GO:0016538|GO:0044772
Arst9g00202 472 Gene3D - 213 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00202 Arst-Chr9 1532005 1537396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00202 2 472 Core Cell Cycle Gene Families AT1G80370 54.123 1.56e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00202 K06627 - gmx:100793657 645.966