Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00134 ATGGATGATTTTTCATGGGAGCATTTGCATCTTCAATTGGAAATGGATGATGAGAATATGAACAATAATAATGGCGTTGATGATGATAATAATGAAGATGATGATGAGTTCTTAAGAGAAATCCTAATGTTGCAACCATCTTTCTCTTCTGAAAATAGTGAAAGTGATAATCTCCAAAACACCGTTGGATCATCATCATCACCGGTTATTGAAGAAGTGCCGCAAGATCTGACGGCTGAGAATTCAAACAACAAGAACAAGAAGAATAATACTATGAAACAACCTCGTAGATCATCATCATCATCATCATCACTACGTTGTTCTTCTCCGAGGAGATACATTTTGTCGTTTGATAACTCAACCATGACACCAGCTACACCAAATCAATTACAAGAAGACCCTTATTATGCAAACAATAATAATAATAATAATAATAATAATAATAATCATAAGAACAAGAAGAACAAAGATCCATCATCATGTGATTATTCTTCTCCAAAAAGGGTGGTGCCGATTTGTACTAATAATAGTGAGAATAAAAAGGAGGAAGGTGCAATAACAACAAAGAGGGCAAGAAGCTCTTCACAAACAATGGATCACATCATGGCAGAGAGAAAGAGGAGACAAGAACTCACTGAGAGGTTCATAGCACTCTCAGCTACCATCCCTGGCTTGACTAAGACAGACAAGGCATCAATACTTAGAGCAGCCATAGATTATGTGAAGCAACTTCAAGAGCAGGTGCAAGAATTAGAAAAGAAAAACAAGAAGAGGAGCAGAGAGTCAGTGATATTGGTGAAGAAATCGAAGAGCAATAATGAAAAAATATTATTAGAAGAAAGTACAATAATATCAAGTGAAACAAGAAGAAGTGAAGATGGTGGAACAGGGCTCCCTGATATTGAAGCAAGATTTATGGGGAAAGATGTTTTGATTGAGATTCATTGTGAGAAGGAGAATGGCATTGAGATGAAAATACTTAATCAGCTTGAAAATCTTCATCTTTTTGTCACTGGAAGTAGTGTTCTTCCTTTTGGCAATTCTGCTCTTGGGATCACTATTATTGCTAAGATGGGAGATTCGTGTGAAATGACAGTGAATGATGTGGTCAGAAACCTTAGGCAAGTGTTCTTGAAGGCACATCAAAATTCACATGGCATTTAA 1164 0.3634 MDDFSWEHLHLQLEMDDENMNNNNGVDDDNNEDDDEFLREILMLQPSFSSENSESDNLQNTVGSSSSPVIEEVPQDLTAENSNNKNKKNNTMKQPRRSSSSSSSLRCSSPRRYILSFDNSTMTPATPNQLQEDPYYANNNNNNNNNNNNHKNKKNKDPSSCDYSSPKRVVPICTNNSENKKEEGAITTKRARSSSQTMDHIMAERKRRQELTERFIALSATIPGLTKTDKASILRAAIDYVKQLQEQVQELEKKNKKRSRESVILVKKSKSNNEKILLEESTIISSETRRSEDGGTGLPDIEARFMGKDVLIEIHCEKENGIEMKILNQLENLHLFVTGSSVLPFGNSALGITIIAKMGDSCEMTVNDVVRNLRQVFLKAHQNSHGI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00134 387 PANTHER BHLH TRANSCRIPTION FACTOR 37 380 - -
Arst9g00134 387 MobiDBLite consensus disorder prediction 48 168 - -
Arst9g00134 387 MobiDBLite consensus disorder prediction 180 199 - -
Arst9g00134 387 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 261 IPR036638 GO:0046983
Arst9g00134 387 SMART finulus 201 250 IPR011598 GO:0046983
Arst9g00134 387 Coils Coil 234 261 - -
Arst9g00134 387 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Arst9g00134 387 Pfam Helix-loop-helix DNA-binding domain 199 245 IPR011598 GO:0046983
Arst9g00134 387 MobiDBLite consensus disorder prediction 48 149 - -
Arst9g00134 387 Gene3D - 193 268 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00134 Arst-Chr9 894975 900123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00134 188 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 50.259 2.45e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g00134 HLH 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00134 - - ahf:112779544 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03283 7 78430550 78432833 Arst9g00134 9 894975 900123 PCT
Arst9g00134 9 894975 900123 Arst7g03284 7 78442766 78443920 PCT