Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00133 ATGGGGATCCAAGATGATGATATCTTCAACCAACGTTACAAGATTAACTCATCACTAATTGTTGATGAAGATCATATCATTAGGGAGATCATGGATCATCATCATCACCAACCAGCTTTCTCATCTGAAAGTGATAATAGTCACTCTCCCACAAATAACAATCAAATCAAAGGTGGTGGAAGTGGCAATACTAGTAGCTTTGTGTTTAACAACAATAATCAACATGCACCATTATTGTTGGATATGAAAGCTTCTACTTCAACATCTTCTCCAAGATCATACATTCTATCTTTCCATGATTCCACCGTTATTGCCACCACGGCGGCGGCCGCGGCTACTCCTCCTCCTCCTCTTCCATCATTAGAAACCTATAATAACAATGAGAAACGACCATACCAACACATTGAAGTGGCATTAGAAAATCAAGCAAAGAAGGTTAGAAGCTCCTCAGAGACACTTGATCACATAATGACTGAGAGAAAAAGGAGAAGGGAATTAACTGAGAGATTTATAGCACTTTCAGCCACTATTCCTGGCTTGAAGAAGATTGACAAATCCACTATACTTAGCGAGGCAATAAGTCATGTGAAACAACTCAAACAACGAGTGAAGGAATTAGAAGAACAAAAGAAGAAGATAAGTGTAGAATCAGTGTCATTCATTATTAGGAAATCCCACCTCATGAATGGAACTAATAATAAGGATGATGAAAAAGGTGCAATCAATAATAAAGCAGCAACAAGTGAAGCACTACTCCCAACGGTGGAAGCAAGAGTGCTCAAAAATGATGTGCTAATAAGGATCCATTGCATGAAACAAAGTGGTATTATGCTCAAAATATTGCGACATCTTAAGAGTTTTGATCTCTCTGCCATTAGCAATAGTGTATTGCCATTTGGAAATTCCACTCTTGATATCACCATTATTGCTCAGATAGGTGACAAATTCAACGTGACAATGAATGATTTAGTGAAAAATCTGAGATTGTCTATCTTGGAGTCCCCTAATGATGATGAAGAACCACACAACAGTAATTGA 1038 0.3786 MGIQDDDIFNQRYKINSSLIVDEDHIIREIMDHHHHQPAFSSESDNSHSPTNNNQIKGGGSGNTSSFVFNNNNQHAPLLLDMKASTSTSSPRSYILSFHDSTVIATTAAAAATPPPPLPSLETYNNNEKRPYQHIEVALENQAKKVRSSSETLDHIMTERKRRRELTERFIALSATIPGLKKIDKSTILSEAISHVKQLKQRVKELEEQKKKISVESVSFIIRKSHLMNGTNNKDDEKGAINNKAATSEALLPTVEARVLKNDVLIRIHCMKQSGIMLKILRHLKSFDLSAISNSVLPFGNSTLDITIIAQIGDKFNVTMNDLVKNLRLSILESPNDDEEPHNSN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00133 345 Coils Coil 189 216 - -
Arst9g00133 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 199 IPR011598 GO:0046983
Arst9g00133 345 Pfam Helix-loop-helix DNA-binding domain 155 200 IPR011598 GO:0046983
Arst9g00133 345 SMART finulus 156 205 IPR011598 GO:0046983
Arst9g00133 345 MobiDBLite consensus disorder prediction 42 70 - -
Arst9g00133 345 PANTHER BHLH TRANSCRIPTION FACTOR 34 332 - -
Arst9g00133 345 Gene3D - 138 219 IPR036638 GO:0046983
Arst9g00133 345 MobiDBLite consensus disorder prediction 37 70 - -
Arst9g00133 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 222 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00133 Arst-Chr9 881943 885588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00133 147 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.055 4.82e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g00133 HLH 8.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00133 - - ahf:112712823 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03284 7 78442766 78443920 Arst9g00133 9 881943 885588 PCT