Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00118 ATGGCTAGACCACAACAACGCTATAGAGGTGTTCGCCAGAGGCATTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCTTTATTGAAGACAAGAATATGGCTAGGAACATTTGAAACAGCTGAGGATGCAGCAAGAGCATATGATGAAGCAGCTAGGTTAATGTGTGGACCAAAAGCAAGAACTAATTTCCCATTTAATCCAAATTTGTCACAATCATCATCATCATCTTCTTCTTCTTCTAAGCTACTATCTCCTACTTTGACTGCAAAATTACATAAATGCCACTTGGCTTCCCTTGCCCTTCAAATGTCCAATAACAAGCAAAAATCATCACAACCCAACAAAGATCCTCAACCACCACCACCATCATCATCATCATCAACATCATCAAATAATAGATTATTCAATAATCAATTCCCAATTGGTGCTGGAACAATTGCATATGAGGAGTTACACTGGCTAGAAGGGAATAATAATAATAATAATAATATTAATAATAATAATTGGGGTGGCATTATTGAAGGACATCATCAAGTTGAGGTTGCACAACAACAATTTCAGCCAGTTCTTGAAGATGATCACATTGAGCAAATGATACAAGAGTTGCTTGATTGTGGATCAATTGAACTTTGCTCAATTGGGTCAAATTAA 651 0.3748 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPFNPNLSQSSSSSSSSSKLLSPTLTAKLHKCHLASLALQMSNNKQKSSQPNKDPQPPPPSSSSSTSSNNRLFNNQFPIGAGTIAYEELHWLEGNNNNNNNINNNNWGGIIEGHHQVEVAQQQFQPVLEDDHIEQMIQELLDCGSIELCSIGSN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00118 216 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Arst9g00118 216 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Arst9g00118 216 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Arst9g00118 216 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Arst9g00118 216 FunFam Ethylene-responsive transcription factor 2 6 66 - -
Arst9g00118 216 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Arst9g00118 216 MobiDBLite consensus disorder prediction 105 134 - -
Arst9g00118 216 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Arst9g00118 216 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Arst9g00118 216 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 126 - -
Arst9g00118 216 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00118 Arst-Chr9 807487 808866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00118 1 213 AP2-EREBP Transcription Factor Family AT5G25190 54.930 1.72e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst9g00118 AP2 1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00118 - - adu:107463739 343.584