Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00110 ATGGACCTTCAAACCTTGGAGAATTTGAAAAAATCTTCATCAAAGAACAAAGATCAAGATGATGATCAAGAAGTGAAAGAGAATACTACTAGTACTGTTCTTCAACTTGATCTAAGTCTTTCAAGCAATGATGAATCAAGAACAAAGCAAGAGCTGAACCTTCTCAACTTCCTTGATCCAAATTCATCAGAAAACTCATCAGATTCAACTCAAGAAGAAGAAGAAGGTAACAAGAACAAGAATCATGAAATGGAGCACAGAACATTCTCATGCAACTATTGCCAGAGAAAGTTTTACAGTTCTCAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGAACATTAGCAAGAAGAGGACACCACAAATCTCCATCATCATCATCATCATCAATGGTAGATTTTGGATACAGATTCTCTCCTTCTTTTTCTTCTTCTTCTTCTTCAAATGGATCCTATAACAAGCCACTTGGGATCCAGCTTCATTCTATGATCAATAAACCTTCTTCTCAGCCACCCTTTTTCGCGATGACCTGTCGCGAAAACGGGTGGCAGAGACAGAAGCTTTATTTGGATTCACACCCTGCAAATCGGAAGCTGAATAGTAATAATGGTTTGGAATCTGAATCACCATCATCCATGGCTGTTTTCGACGGCAGCGGCGGCGTGCCGAGGTTAGGGAAGTTTCATCCTACAAAGCTTGTGACACAAGGTTTTGGAGGATATTGGTTTGGTAGTGTTTCTCATTTGAATTCTAAACATGAAAATAAGTTGCAGAAGCTTGATTTGTCACTCAAGCTCTAA 807 0.3928 MDLQTLENLKKSSSKNKDQDDDQEVKENTTSTVLQLDLSLSSNDESRTKQELNLLNFLDPNSSENSSDSTQEEEEGNKNKNHEMEHRTFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGHHKSPSSSSSSMVDFGYRFSPSFSSSSSSNGSYNKPLGIQLHSMINKPSSQPPFFAMTCRENGWQRQKLYLDSHPANRKLNSNNGLESESPSSMAVFDGSGGVPRLGKFHPTKLVTQGFGGYWFGSVSHLNSKHENKLQKLDLSLKL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00110 268 MobiDBLite consensus disorder prediction 28 67 - -
Arst9g00110 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Arst9g00110 268 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 268 IPR044246 GO:0009788
Arst9g00110 268 MobiDBLite consensus disorder prediction 1 84 - -
Arst9g00110 268 MobiDBLite consensus disorder prediction 11 27 - -
Arst9g00110 268 MobiDBLite consensus disorder prediction 103 133 - -
Arst9g00110 268 Gene3D Classic Zinc Finger 62 140 - -
Arst9g00110 268 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Arst9g00110 268 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00110 Arst-Chr9 763495 764516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00110 19 268 C2H2 Transcription Factor Family AT5G10970 38.113 4.64e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst9g00110 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00110 - - adu:107463735 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00110 9 763495 764516 Arst9g00110 9 763495 764516 ECH