Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00108 ATGGAGAATCATAATAATGAAGAAATCCCATCAGCACCATCAACACCAGCCACACCAGGGACTCCAGGTGCACCTCTCTTCGGAGGTTTCAGATCCACCAACAATAATGGTGGAGGTCTTAGTAGAAAATCACTCCTCAAGAACTGCAAGTGTTTCAGCGTTGAAGAATGGACCATTGAAGATGGTGCCTTACCCAAAGTCTCTTGCTCTTTGCCACCTCCTCCTGTTCCTCTTGCCAGAAAGGTGGGAGCTGAGTTCATCGGAACCTTCATTCTAATGTTCGCCGGAACAGCGGCGGCTATAGTGAATGAAAAGACAAATGGATCCGAAACTCTGATTGGTTGTGCTGCGGTCACCGGCCTTGCTGTTATGGTGATCATTCTCTCCACCGGACACATCTCCGGTGCTCATCTAAACCCTGCTGTCACCATCTCCTTTGCCGCTTTGAAGCACTTCCCATGGAGGAATGTGCCAATGTATATTGGAGCACAGATATTGGCATCAGTGTGTGCGGCATTTGCACTTAAGGGAGTGTATCATCCATTTATGGGGGGAGGAGTGACGGTTCCTTCAGAAGAATATGGCCAAGTTTTTGCTTTAGAATTCATCATCAGTTTCAATCTCATGTTTGTTGTCACTGCTGTCGCCACCGACACTAGAGCTGTTGGAGAGTTAGCGGGAATTGCGGTGGGAGCCACCGTCATGCTCAACATACTTATAGCCGGACCAGTATCAGGAGGATCAATGAATCCAGTAAGAACATTAGGTCCAGCAATTGCAGCAAATAATTATAAAGCAATTTGGATTTATTTGACCGCTCCAATTCTTGGTGCACTTGGTGGTGCTGGTGCTTATTCTGCTGTTAAACTTCCTAATGAAGATGAAAATCCTGAACTCAAGGCTCCTTCAAACCCTGGAAGCTTCAGAAGGTGA 933 0.4662 MENHNNEEIPSAPSTPATPGTPGAPLFGGFRSTNNNGGGLSRKSLLKNCKCFSVEEWTIEDGALPKVSCSLPPPPVPLARKVGAEFIGTFILMFAGTAAAIVNEKTNGSETLIGCAAVTGLAVMVIILSTGHISGAHLNPAVTISFAALKHFPWRNVPMYIGAQILASVCAAFALKGVYHPFMGGGVTVPSEEYGQVFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPVSGGSMNPVRTLGPAIAANNYKAIWIYLTAPILGALGGAGAYSAVKLPNEDENPELKAPSNPGSFRR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00108 310 CDD MIP 80 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 PANTHER AQUAPORIN NIP2-1 46 293 IPR034294 -
Arst9g00108 310 Pfam Major intrinsic protein 78 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 MobiDBLite consensus disorder prediction 1 32 - -
Arst9g00108 310 SUPERFAMILY Aquaporin-like 77 298 IPR023271 -
Arst9g00108 310 ProSitePatterns MIP family signature. 137 145 IPR022357 -
Arst9g00108 310 PRINTS Major intrinsic protein family signature 156 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 PRINTS Major intrinsic protein family signature 200 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 PRINTS Major intrinsic protein family signature 268 288 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 PRINTS Major intrinsic protein family signature 231 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 PRINTS Major intrinsic protein family signature 119 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g00108 310 Gene3D Glycerol uptake facilitator protein. 75 299 IPR023271 -
Arst9g00108 310 FunFam Aquaporin NIP2-1 68 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00108 Arst-Chr9 740091 744412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00108 5 310 Major Intrinsic Protein MIP AT1G80760 75.405 3.94e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00108 K09874 - gmx:100815637 450.669