Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00096 ATGGCTCCAGAGCATCCACAGTTTATGTCAAGCACCGGTAACCACAGCTTCACAAATGCACCCTTAATAGACTCCATTGATGTTCACCAAATTGAAGTTCCTGATAGGAGGAGTTGGAAGAATTTATTTGCATATATGGGGCCTGGATTTCTTGTTTCTATTGCATACATAGACCCAGGAAACTTTGAGACGGATCTTCAATCTGGAGCACAATATAAATATGAGTTACTTTGGATTGTATTGTTGGCATCATGTGCTGCTCTTGTGATTCAATCAATGGCAGCAAATCTTGGAGTTGTAACTGGAAAGCACTTAGCAGAGCATTGTAGAACTGAATATCCGCGAGTACCCAACACGATCCTTTGGATTATTGCCGAAATTTCTGTTGTGGCCTGTGATATTCCAGAAGTAATTGGGACAGCTTTTGCATTGAACATGCTCTTCAGTATACCTGTTTGGATTGGTGTTCTTCTTACAGGGCTAAGTACATTGATTCTCTTAGCATTACAACAATATGGGATTCGAAAACTCGAATTCTTAATTGCTTTTCTGGTATTTACCATCTGTGCTTGCTTTATGGCTGAGCTTGGATATGCAAAGCCTGATGCAAAAGAAGTTGTGAAGGGTATGTTTGTTCCACAGCTTAAAGGAAATGGTGCTACCGGCCTTGCAATTTCGCTCCTCGGCGCCTTGGTTATGCCACACAATCTCTTCCTCCACTCTGCATTAGTACTTTCGAGGAAAATACCTCGATCCGTTCGTGGAATCAAGGAAGCTTGCAGATTTTACATGATAGAAAGTGGATTTGCTCTTATGGTGGCCTTCCTCATAAATATCTCTGTTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAATTTGAGTGCAGATGATCAGAAGAGCTGTGAGGATTTGGATTTGAACAAAGCCTCATTTCTACTTAGAAATGTGTTGGGGAAATGGAGTTCAAAACTCTTTGCAATCGCTTTGCTAGCATCTGGTCAAAGTTCTACCATTACAGGAACATATGCAGGGCAATATGTCATGCAGGGTTTTCTAGATTTGAGACTGAAGCCATGGATTAGGAACATGTTAACTCGTTGCTTAGCCATTACTCCAAGTTTGGTTGTAGCACTGATTGGTGGCTCTTCCGGTGCCGGAGAGCTCATAATTATTGCATCTATGATATTATCATTTGCGCTTCCATTCGCGTTGATTCCACTTCTCAAGTTCACTAGCAGCAAAACCAAGATGGGAGAACATGTTAACTCTTTGATGATCGCGTCTGTTACTTGGATGATCGGGTCGTTGATCATGACCATAAACATATACTACTTAATATCTAGCTTCATCAAGCTGCTTCTTCATGCTAAGATGAAGATGGTTGGAAAAGTGTTTGTGGGAATACTAGGATTCTCCGGCGTGGCGGTGTACTTAGCCGGAATTGCATATCTGGTGGTGCGGAAGAACAGAAAGGCCACACCGTTTTTGGCACTAACATCAGCAGCAGCAGCAGAGGATTGCAATGAGTCACTTTCTCATCTTCCAAGAGAAGACATAGTAAGCATGCAATTGCCTGAGAGAATTGTTAGTCCAGCAGATATTTGA 1608 0.4179 MAPEHPQFMSSTGNHSFTNAPLIDSIDVHQIEVPDRRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIVLLASCAALVIQSMAANLGVVTGKHLAEHCRTEYPRVPNTILWIIAEISVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTICACFMAELGYAKPDAKEVVKGMFVPQLKGNGATGLAISLLGALVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESGFALMVAFLINISVISVSGAVCNSSNLSADDQKSCEDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNMLTRCLAITPSLVVALIGGSSGAGELIIIASMILSFALPFALIPLLKFTSSKTKMGEHVNSLMIASVTWMIGSLIMTINIYYLISSFIKLLLHAKMKMVGKVFVGILGFSGVAVYLAGIAYLVVRKNRKATPFLALTSAAAAEDCNESLSHLPREDIVSMQLPERIVSPADI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00096 535 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 41 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 334 353 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 121 147 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 174 195 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 149 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 394 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 362 379 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PRINTS Natural resistance-associated macrophage protein signature 224 247 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 34 492 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 Pfam Natural resistance-associated macrophage protein 62 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst9g00096 535 NCBIfam Nramp family divalent metal transporter 47 415 - -
Arst9g00096 535 Hamap Divalent metal cation transporter MntH [mntH]. 34 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00096 Arst-Chr9 667261 677850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00096 10 535 Inorganic Solute Cotransporters AT1G15960 78.220 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00096 K21398 - gmx:100808501 869.381