Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00091 ATGGATTGTTCTTCTTGGATTAACACTTCCTTGGATCTCAACATTAATCCTCATCATCATAGAGTTCATCATGAGGAAGTTCCTAAGAAACAGGTTGAAAGCAATGTTTTCTCATTGGGGTTGTCCATGGTTCCTTTGAAAGAAGAGTCCAATACGGATTACTTAGAAGAGGAACTGAAGCGTGTGACTGCCGAAAACAAGAAATTGGCTGAAATGCTTTCTGTGGTTTGTGAGAATTACAACACTTTGAGGAACCACTTGATGGAATACATGAAAAAAAATCCTGAGAAGGAGCTTAGCCCTTCATCAAAGAAGAGGAAATCTGAGAGCAGCAACAACAATTGTGATCCGATGGCATTGGCGTCGAACAATGGGAACTCCGAGAGCAGCTCGACCGACGAAGAATCGTGCAAGAAGCCGAGGGAAGAAACCATCAAGGCTAAGACCTCAAGAGTTTATGTTAGGACGGAAGCATCCGATACAAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGACAAAAAGTAACAAGAGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGTCCTGTAAAGAAGAAGGTGCAAAGAAGTGTTGAAGATCAATCTGTGCTGGTTGCGACTTACGAGGGTGAGCACAACCACCCCCTCCCTTCTCAGATGGAGGCAACATCCGGCCCGAACCGTTGTATGACCATAGGTTCGGTACCTTGTTCGGCATCAATTAGCTCTTCTGCACCAACAGTTACTCTTGACTTGACAAAATCCAAGCCCAGCAACAACAATGATTCCAAGATTACAACAAAACCAAAGGTTGATTCACCTGAACAAGTACCTAATGTTTTGGTGGAACAGATGGCTAGTTCATTGACCAAAGATCCAAATTTCAGAGCAGCACTTGTTGCTGCCCTTTCAGGAAGATTGATGCACAATAATTGA 963 0.4309 MDCSSWINTSLDLNINPHHHRVHHEEVPKKQVESNVFSLGLSMVPLKEESNTDYLEEELKRVTAENKKLAEMLSVVCENYNTLRNHLMEYMKKNPEKELSPSSKKRKSESSNNNCDPMALASNNGNSESSSTDEESCKKPREETIKAKTSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPSQMEATSGPNRCMTIGSVPCSASISSSAPTVTLDLTKSKPSNNNDSKITTKPKVDSPEQVPNVLVEQMASSLTKDPNFRAALVAALSGRLMHNN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00091 320 MobiDBLite consensus disorder prediction 94 111 - -
Arst9g00091 320 Pfam WRKY DNA -binding domain 166 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst9g00091 320 Gene3D WRKY domain 148 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst9g00091 320 MobiDBLite consensus disorder prediction 260 283 - -
Arst9g00091 320 SMART WRKY_cls 165 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst9g00091 320 FunFam WRKY transcription factor 40 150 227 - -
Arst9g00091 320 MobiDBLite consensus disorder prediction 132 150 - -
Arst9g00091 320 Coils Coil 52 72 - -
Arst9g00091 320 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 316 IPR044810 GO:0003700
Arst9g00091 320 ProSiteProfiles WRKY domain profile. 160 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst9g00091 320 MobiDBLite consensus disorder prediction 94 151 - -
Arst9g00091 320 SUPERFAMILY WRKY DNA-binding domain 162 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst9g00091 320 MobiDBLite consensus disorder prediction 112 131 - -
Arst9g00091 320 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00091 Arst-Chr9 575925 577924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00091 4 320 WRKY Transcription Factor Family AT1G80840 53.963 1.11e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst9g00091 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00091 - - gmx:100807966 446.432