Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00055 ATGATGGCGAAGAAGAAAACCCTCATCATCAAGAATAATGATAGTAATAGTAGTTCTTCTTCTTCTGCTCCCACACCATCAAAGAAAGTTGTGAAAAAAAGAACCCGCAAAACCATTCCAAGAGATTCACCTCCTCAACGAAGCTCTGTCTACCGTGGTGTCACTAGACATCGATGGACGGGTCGTTACGAAGCTCATTTGTGGGACAAGAATTGTTGGAATGAATCACAGACGAAGAAAGGAAGACAAGGAGCATATGATGATGAAGAAGCGGCTGCACGTGCTTATGACTTGGCAGCATTGAAGTATTGGGGCCAAGAAACCATACTCAATTTCCCAGCATCAAATTATCAAGAGGAGCTCAAGGATATGGAGGGACAGTCTAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGAGTCTCAAAATACAGAGGGGTAGCAAGACACCACCATAATGGAAGATGGGAAGCTAGAATTGGCAGGGTCTTCGGCAACAAATATCTATATCTTGGAACTTATGCTACGCAAGAAGAAGCTGCTATGGCATATGACATGGCTGCCATAGAATATCGTGGGCTTAATGCTGTTACAAACTTTGATCTTAGCCATTACATCAATTGGCTACGTCCTAAACTCCAAGAAATTCAGAAAAACCCTAGCCATAATAATCAAGAACAATCATCTAGTGGTTCCGAACTCGATAATAATCAATTAGTATTTGGTTATGATCAAGTCGGTTTAACCACTAGCGAAACTGGGTCTGAAGACTCGACCCAGTTTAAAACTGGTGGTGAAACCGTGCCAACTTCGGCACTTGAGATTCTCTTAAAATCGTCGAAATTAAAAGAAATGTTAGTAAGAAATTCGGTCGACGAAGATAATCTTCACTCTCAAACATCTTCGGAATCGAACCCTACTCCTCGGCGCACATTTCCGGAAGACATTCAAACGTTCTTTGAGAGCCATGATTCCAATATCTACACTGAAAATGATGACATTATATTTGGCGAATTGGGCTCAATTTCAGCACCATTTTTTCATTATGAGCTTGATGCTTGA 1080 0.4102 MMAKKKTLIIKNNDSNSSSSSSAPTPSKKVVKKRTRKTIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQTKKGRQGAYDDEEAAARAYDLAALKYWGQETILNFPASNYQEELKDMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAMAYDMAAIEYRGLNAVTNFDLSHYINWLRPKLQEIQKNPSHNNQEQSSSGSELDNNQLVFGYDQVGLTTSETGSEDSTQFKTGGETVPTSALEILLKSSKLKEMLVRNSVDEDNLHSQTSSESNPTPRRTFPEDIQTFFESHDSNIYTENDDIIFGELGSISAPFFHYELDA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00055 359 FunFam AP2-like ethylene-responsive transcription factor 148 209 - -
Arst9g00055 359 SUPERFAMILY DNA-binding domain 148 209 IPR016177 GO:0003677
Arst9g00055 359 MobiDBLite consensus disorder prediction 9 28 - -
Arst9g00055 359 SMART rav1_2 50 119 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 Pfam AP2 domain 148 199 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 Pfam AP2 domain 49 105 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 SUPERFAMILY DNA-binding domain 49 115 IPR016177 GO:0003677
Arst9g00055 359 ProSiteProfiles AP2/ERF domain profile. 50 113 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 MobiDBLite consensus disorder prediction 298 318 - -
Arst9g00055 359 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 FunFam AP2-like ethylene-responsive transcription factor 49 115 - -
Arst9g00055 359 Gene3D AP2/ERF domain 50 115 IPR036955 GO:0003700|GO:0006355
Arst9g00055 359 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Arst9g00055 359 MobiDBLite consensus disorder prediction 1 50 - -
Arst9g00055 359 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 261 - -
Arst9g00055 359 CDD AP2 148 209 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 PRINTS Ethylene responsive element binding protein signature 189 209 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Arst9g00055 359 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00055 Arst-Chr9 371104 376633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00055 13 211 AP2-EREBP Transcription Factor Family AT1G72570 60.952 7.16e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst9g00055 AP2 1.6e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00055 K09285 - csav:115701471 426.402