Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00046 ATGAAGGAGAGGCTTTGTGAGCTCTGTAAGGAAAAAGCTTCTCTCTACTGCGCCTCTGACTCCGCCTTCCTCTGCTGGAAATGCGACGCCACCGTTCATAATGCCAACTTCCTCGTCGCTCGCCACCGCCGCCGCCTCCTCTGTTTCAACTGCAATTCCTTCGCCGGAGTCCACATCTCCGGCGCCTCATCTCGCCGCACCGACGCCACCTGCCGATCCTGCTCCCCGACGGAGATTCATTCCTCCGACGAGGAGGAGGAGGAGGAAGATGACAATTCCCTCTCTTCTTCACCTCCTTCTTCCTCATCCTCCTCCTCTGCATGCGTTTCCAGCTCGGAGCCACGCGCCGGGAACAAGATCAGAACAAAACACTTGCCGGAAAAGAGAATCAGAACGGTAACCTCTTCCGGTTCGGCGGTTACGACGGACGACGATGATTTTTCAACGGCGAAGCAAAAGCGGCAGAGGAATAACAAGAAGAAGAATAGTAATGGCGGTGGATCTGGTTCAGATGAGGTGAGAACGGCGTCGGCGAAAGAGTATTCAGTGTTCGCGAAATGGAGCGAGGAATTAGGGTTGGGAATAAACGAGGGGAAACGCGTGTCGTGCGTGGCGTGCAGAGCGTTGAGAGTATGGGTGAAAAAATGGAAGGGAGTTGGTATTCCGTATAAGGTGGGTGCTGCGACGTCGTTTTGGTTGGGTTTGAGATTTTGTGGGATGACGTTTGAGAATCTGCGGAGATTGGAAGAGATCTCAGGTGTGCCAGCTAAGCTCATTCTCCAAGCATATGCCATGCTCTCACGTGTCTTCTTCTTCTCCCAACAACAACAAACCACTTCTACTCCCTTCTTCCATTTGCAAGAAGGCTCTGATGAGTCTTAG 882 0.5272 MKERLCELCKEKASLYCASDSAFLCWKCDATVHNANFLVARHRRRLLCFNCNSFAGVHISGASSRRTDATCRSCSPTEIHSSDEEEEEEDDNSLSSSPPSSSSSSSACVSSSEPRAGNKIRTKHLPEKRIRTVTSSGSAVTTDDDDFSTAKQKRQRNNKKKNSNGGGSGSDEVRTASAKEYSVFAKWSEELGLGINEGKRVSCVACRALRVWVKKWKGVGIPYKVGAATSFWLGLRFCGMTFENLRRLEEISGVPAKLILQAYAMLSRVFFFSQQQQTTSTPFFHLQEGSDES 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00046 293 CDD Bbox1_BBX-like 5 47 - -
Arst9g00046 293 MobiDBLite consensus disorder prediction 67 173 - -
Arst9g00046 293 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Arst9g00046 293 SMART bboxneu5 1 47 IPR000315 GO:0008270
Arst9g00046 293 MobiDBLite consensus disorder prediction 94 116 - -
Arst9g00046 293 Pfam B-box zinc finger 2 44 IPR000315 GO:0008270
Arst9g00046 293 MobiDBLite consensus disorder prediction 131 145 - -
Arst9g00046 293 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00046 Arst-Chr9 332103 333311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00046 1 74 C2C2-CO-like Transcription Factor Family AT5G54470 50.000 5.28e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst9g00046 zf-B_box 6.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00046 - - adu:107463828 503.056