Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00022 ATGGCTGACCATGGCATCACCATGTCACTTTCCCACACCTCCGACGACGACTCCTCCGACCACAACACCCCTGCCACCGCTGCTGCCGTCGTCTCCAGGAGGCTGCCACCCTCGTCCTCCACCGGCAACCATTCATACCACCATCACCTCTCCGAGCCCCCGCCCCAGAAGAAGCCACGTGGCAGGCCTCCGGGGTCCAAGAATAAGCCGAAGCCACCCGTGGTGATCACTCAGGAAAGCGACCACGTGATGAAACCGGTGGTGATCGAGGTTGCCGCCGGCTCCGACGTGGTGGAGGCGGTGGTGAGTTTTGCCCGCCGGCGCCAGGTAAGCTTGTCAGTGTTGAGTGGGTCAGGAACCATTGCGAACGTCACCTTACGTCACCCTTACTCACATGCTCCTGCATTAACCCTCCATGGACCCTTCACCTTGTTGTCGTTCTCTGGAAGCTACATCGCTGGCCCTTTCACTCCTTCACCTCGTCCTCTTCCTCTTCCTCTTCCTCTTGCCTCTCCAGCTTCCGCTTCCGCTTCAACGGATGCTTCCTCAGCCAGCCCTACCCCCACCTGCTCCAGCTTCGCTGTTTCCTTCTCCGGTTCCCAGGGACAGATCTTCGGCGGGGTTGTGGCTGGGACACTCGTGGCGGCCAGCACGGTTGTGGTGTCGGCCTCCGTCTTCAAGAGGCCTGAGTTCCACCAGGTTGGCGAGGGTGTGAGTGCTGGTGGGCGTGACGGTGATAATAAGGACGATGGTGATCGTCATAATAACTACAGTAATGCAGGTGGTGGCGATCATCACGGTGGTTGTGGTGCAGTTGTGAGTGAGAACCCTCTTACTGTGTTCAATGTGGGGAATGGCGGTGGTGGAGGAAACGGCATGAATAATAGCCACCCTGCTGATGTGAACGTCATGCAATGGGGCCACACTCTCTCGGCTTCTCGCGCTGCCAATTACTGA 957 0.5862 MADHGITMSLSHTSDDDSSDHNTPATAAAVVSRRLPPSSSTGNHSYHHHLSEPPPQKKPRGRPPGSKNKPKPPVVITQESDHVMKPVVIEVAAGSDVVEAVVSFARRRQVSLSVLSGSGTIANVTLRHPYSHAPALTLHGPFTLLSFSGSYIAGPFTPSPRPLPLPLPLASPASASASTDASSASPTPTCSSFAVSFSGSQGQIFGGVVAGTLVAASTVVVSASVFKRPEFHQVGEGVSAGGRDGDNKDDGDRHNNYSNAGGGDHHGGCGAVVSENPLTVFNVGNGGGGGNGMNNSHPADVNVMQWGHTLSASRAANY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00022 318 MobiDBLite consensus disorder prediction 1 79 - -
Arst9g00022 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 261 IPR014476 GO:0003680
Arst9g00022 318 MobiDBLite consensus disorder prediction 33 47 - -
Arst9g00022 318 MobiDBLite consensus disorder prediction 235 263 - -
Arst9g00022 318 CDD DUF296 85 221 IPR005175 -
Arst9g00022 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 227 IPR005175 -
Arst9g00022 318 Gene3D - 84 238 - -
Arst9g00022 318 ProSiteProfiles PPC domain profile profile. 81 248 IPR005175 -
Arst9g00022 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00022 Arst-Chr9 209441 210397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00022 57 234 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 45.556 2.72e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00022 - - adu:107463674 478.018