Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00003 ATGGGTCGGTGCCGAGCTGCTTCGCGCCCTGCGGACGATGATCCCAACCTAAGATCCAAGAAAAAAAAGGCTGCTTTGAATGTAGAGAATTTAGACACTTCATCCCCAGATGTGGCAGCTCAAGGAGTAACTGATGGGAAAGGAGCTTTATACCACTGCAATTATTGCAACAAAGATATTTCAGGGATGATTCGCATTAAGTGTGCTGTATGTCAAGATTTTGATCTCTGCATAGAGTGTTTCTCTGTTGGGGCTGAAGTGACACCTCACAAAAGCAATCATCCATATATGATTATGGATAATCTATCTTTTCCCCTTATAACTCCAGATTGGAATGCAGATGAAGAGATGTTACTCTTAGAGGGCATTGAGATGTATGGATTTGGGAATTGGAATGAAGTTGCTGAGTATGTTGGGACAAAAAGCAAATCTCAATGTATTGACCATTATAATGCTATATATATGAATTCACCGTGCTTTCCTCTCCCTGATTTGTCACATGTTATGGGAAAAAACAAAGAGGAACTTCTTGAGATGGCAAAGGGACATGAAGTCAAGAAAGGTTTGTTTCTATATAATTTAAAATCACAGGACCATCCTTTTAATGCAGATGGAGTTAAGGTGGAAGAATATCAATCAGATCGGAGCATTGGAGAGAAGAAACCGAAGTTATCTGGCAAAGTTGAGCCTTCTGTGACCGAGTTGAGTGGATACAGTTTTAAGAGAGAGGAATTCGAAATTGAATATGACAATGATGCAGAGCAAGTATTAGCAGATATGGAATTTAAGGACATCGATACTGAGTCTGAACGTGAAATGAAACTGCATGTGCTCCATATTTATTCAAGAAGATTAGATGAGCGGAAGCGCAGAAAGAATTTTATACTTGAAAGAAATTTACTTTATCCTGATCCATTTGAGAAAAGTCTCTCTCCTGAGGAGGTTGAAATATGTCAGCGCTATAAGGTCTTCACACGGTTTCACTCGAAAGAAGAGCATATGGAGTTGCTCAAAAATATTATTGAAGAACACAGGCTTATCAAAAGAATACAGGATTTGCAGGAAGCACATACTGCTGGCTATCAAACATCTACAGAGGCTTACAAATTTATCGAACAGAAGAAAAAAGAAGCGGAACGTGTTGTTAAAGAAAATAATCATATTGGTGTTGGTGCTAAGATATTACCAAGACCGAATTATCTCAAAGGAGAACTTGATAGCAACTCACTGGGTCTTCATAAGGATATTACAGCTCCACTTTCTGGGGTGAAGTATCCAGCTGCGGCCATACAGGATATATCAAGATCTCTAGAAGAATGGGATATTAGTGGATTCGCCGGGGCTGAACTGCTGTCTGAATCTGAGATAAATCTTTGTAATGAGATCAGAATACTACCATCACACTATTTCAAAATGCAGAATGTCTTATCATCAGAAATTTCAAAAGGCAACATATCGAAGAAATGTGATGCGCATAGGTTGTTCAAGGTCGAGCCAAGCAAGGTTGATAGAGTTTATGATATGCTTATAAAAAAGGGGATTGCTTCTTCAAATTGA 1557 0.3886 MGRCRAASRPADDDPNLRSKKKKAALNVENLDTSSPDVAAQGVTDGKGALYHCNYCNKDISGMIRIKCAVCQDFDLCIECFSVGAEVTPHKSNHPYMIMDNLSFPLITPDWNADEEMLLLEGIEMYGFGNWNEVAEYVGTKSKSQCIDHYNAIYMNSPCFPLPDLSHVMGKNKEELLEMAKGHEVKKGLFLYNLKSQDHPFNADGVKVEEYQSDRSIGEKKPKLSGKVEPSVTELSGYSFKREEFEIEYDNDAEQVLADMEFKDIDTESEREMKLHVLHIYSRRLDERKRRKNFILERNLLYPDPFEKSLSPEEVEICQRYKVFTRFHSKEEHMELLKNIIEEHRLIKRIQDLQEAHTAGYQTSTEAYKFIEQKKKEAERVVKENNHIGVGAKILPRPNYLKGELDSNSLGLHKDITAPLSGVKYPAAAIQDISRSLEEWDISGFAGAELLSESEINLCNEIRILPSHYFKMQNVLSSEISKGNISKKCDAHRLFKVEPSKVDRVYDMLIKKGIASSN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00003 518 Gene3D - 109 158 - -
Arst9g00003 518 ProSiteProfiles SANT domain profile. 106 158 IPR017884 -
Arst9g00003 518 PIRSF Txn_adaptor_ADA2 39 518 IPR016827 GO:0003713|GO:0006357|GO:0035065
Arst9g00003 518 ProSitePatterns Zinc finger ZZ-type signature. 53 80 IPR000433 GO:0008270
Arst9g00003 518 MobiDBLite consensus disorder prediction 1 20 - -
Arst9g00003 518 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 159 IPR017930 -
Arst9g00003 518 SMART sant 107 156 IPR001005 -
Arst9g00003 518 SUPERFAMILY Homeodomain-like 435 514 IPR009057 -
Arst9g00003 518 SUPERFAMILY RING/U-box 51 114 - -
Arst9g00003 518 FunFam Transcriptional adapter 2 104 156 - -
Arst9g00003 518 Gene3D - 45 99 IPR043145 -
Arst9g00003 518 ProSiteProfiles SWIRM domain profile. 431 518 IPR007526 GO:0005515
Arst9g00003 518 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 51 512 - -
Arst9g00003 518 Pfam Myb-like DNA-binding domain 110 151 IPR001005 -
Arst9g00003 518 ProSiteProfiles Zinc finger ZZ-type profile. 48 104 IPR000433 GO:0008270
Arst9g00003 518 ProSiteProfiles Myb-like domain profile. 111 154 IPR001005 -
Arst9g00003 518 CDD SANT 111 151 IPR001005 -
Arst9g00003 518 SMART zz_5 47 92 IPR000433 GO:0008270
Arst9g00003 518 FunFam Transcriptional adapter 44 99 - -
Arst9g00003 518 Pfam Zinc finger, ZZ type 51 91 IPR000433 GO:0008270
Arst9g00003 518 Gene3D - 431 516 IPR036388 -
Arst9g00003 518 SUPERFAMILY Homeodomain-like 103 157 IPR009057 -
Arst9g00003 518 FunFam Transcriptional adapter 2 432 516 - -
Arst9g00003 518 CDD ZZ_ADA2 51 99 IPR041983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00003 Arst-Chr9 59949 72221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00003 1 518 EF-hand Containing Proteins AT3G07740 51.504 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst9g00003 Myb_DNA-binding 2.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00003 K11314 - gmx:100779424 726.857