Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03969 ATGAAGAAGAGACAGGTGGCGGTGAAGACTTCGTCGACGGTGATAAGGAACGTAAGGTACGGGGAGTGCCAGAAGAATCACGCGGCCAATATCGGAGGGTACGCGGTGGATGGGTGCAGGGAGTTCATGGCCAGTGCAGGGGAAGGAACCAACGGCGCTCTCACGTGTGCTGCTTGTGGCTGCCACCGCAACTTCCACCGCAGGGAAGTGCAAACTGAGGTTGTCTGTGAGTACTCTCCTCCTCATCATCAAAACTGA 258 0.562 MKKRQVAVKTSSTVIRNVRYGECQKNHAANIGGYAVDGCREFMASAGEGTNGALTCAACGCHRNFHRREVQTEVVCEYSPPHHQN 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03969 85 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 20 69 IPR006456 -
Arst8g03969 85 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 19 70 IPR006456 -
Arst8g03969 85 Pfam ZF-HD protein dimerisation region 17 70 IPR006456 -
Arst8g03969 85 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 12 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03969 Arst-Chr8 49892336 49893922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03969 1 85 Zinc finger-homeobox gene family AT1G18835 72.527 3.21e-40 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst8g03969 ZF-HD_dimer 6.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03969 - - mtr:11409341 164.466