Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03962 ATGCCAGAGGTATGCCTCGATCCTTTGAAACACAGAGGTGGGAGCACTTGCACAAAGCACTCCGACGCTCAATCGCACTTCGCCGTAGCTTGTCACGTGTCGTCGGCGTCACCCGACTCACCCCCTCCTTGTTACTTCGCATGCCGGGCTGACCAGAAGCTCCGCGCCTATCAGGCTCCTCTTCTACAGTCTGCTACGCGCTTCCATTTTCTCGGTGTGTTGATATTCAGTATTTCTCTTCAATCTGCTGAGCCTGTCACCGGAACCGGAGCCCCTTTTCTCTCAGCGCGTCGCTGTCTTCCTCCTCTGTCCGCAAAAGATATTTTAAAATTTATAAGCATAGAGATGAAACATGCGGCGGAGGCTGCACCGGAGGAAAACTGCTCTGCCAAGCCAGCCTCCAAGGGGGAGGGTCTCTGCCAGTACTACTCTCTCCACATCCATGAGCTACAGCTCTTTCTCTGCCAGAAAACGCACAATCTCAACCGTCTCGAGGCTCAGCGCAATGAGCTCAATTCTAGAGTGAGGATGCTCAGGGAGGAGTTGCAGTTTCTCCAGGAGCCCGGATCGTATGTAGGGGAAGTTGTGAAAGTTATGGGAAAGAGCAAAGTCTTAGTCAAGGTTCATCCAGAAGGGAAATATGTGGTGGACATTGATAAAGATGTTAACATTACAAAGATTACTCAATCGACAAGAGTAGCTCTTCGTAATGATAGTTATGTCCTTCATTTAATTCTACCGAGCAAAGTTGATCCATTGGTCAATCTGATGAAAGTTGAGAAAGTTCCGGATTCTACTTATGACATGATTGGTGGCTTAGACCAGCAAATCAAGGAGATTAAAGAGGTCATTGAGCTACCAATTAAACATCCCGAACTGTTTGAAAGTCTTGGAATAGCTCAACCTAAGGGTGTTCTACTCTATGGGCCACCTGGTACTGGAAAAACGTTGTTGGCTAGGGCAGTGGCTCATCATACTGACTGTACCTTCATCAGGGTATCTGGGTCTGAATTAGTTCAGAAATACATTGGAGAAGGTTCCAGAATGGTCAGGGAACTTTTTGTCATGGCCAGGGAGCATGCTCCATCAATTATCTTCATGGACGAAATTGACAGTATTGGATCTGCTCGAATGGAATCTGGAAGTGGCAATGGTGATAGTGAGGTGCAGCGCACTATGCTGGAACTTCTCAACCAGCTAGATGGATTTGAAGCTTCAAATAAAATCAAGGTTATACAAAAAATATGCAATACAGGTTTTGATGGCACAAACCGGATTGATATCCTGGATCAAGCCCTCCTTAGACCTGGACGAATTGACAGGAAGATTGAATTTCCAAACCCAAATGAGGAGTCTCGACTAGATATTTTGAAAATTCATTCAAGAAGAATGAACTTAATGCGTGGCATTGATTTGAAGAAGATTGCTGAGAAGATGAATGGAGCATCTGGTGCAGAGCTTAAGGCCGTGTGTATAGAAGCTGGAATGTTTGCTTTGAGGGAGAGCAGAGTACATGTGACACAGGAGGACTTTGAGATGGCTGTGGCCAAGGTTATGAAAAAGGAAACAGAGAAGAACATGTCATTGCGGAAGTTGTGGAAGTGA 1605 0.4592 MPEVCLDPLKHRGGSTCTKHSDAQSHFAVACHVSSASPDSPPPCYFACRADQKLRAYQAPLLQSATRFHFLGVLIFSISLQSAEPVTGTGAPFLSARRCLPPLSAKDILKFISIEMKHAAEAAPEENCSAKPASKGEGLCQYYSLHIHELQLFLCQKTHNLNRLEAQRNELNSRVRMLREELQFLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKDVNITKITQSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVIQKICNTGFDGTNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCIEAGMFALRESRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03962 534 SMART AAA_5 301 449 IPR003593 GO:0016887
Arst8g03962 534 Pfam AAA+ lid domain 470 512 IPR041569 -
Arst8g03962 534 FunFam 26S protease regulatory subunit 8 258 447 - -
Arst8g03962 534 CDD RecA-like_PAN_like 266 445 - -
Arst8g03962 534 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 138 526 - -
Arst8g03962 534 Pfam Proteasomal ATPase OB C-terminal domain 192 247 IPR032501 -
Arst8g03962 534 Pfam ATPase family associated with various cellular activities (AAA) 305 446 IPR003959 GO:0005524|GO:0016887
Arst8g03962 534 FunFam 26S protease regulatory subunit 8 452 529 - -
Arst8g03962 534 Gene3D - 452 529 - -
Arst8g03962 534 Gene3D - 154 257 IPR012340 -
Arst8g03962 534 FunFam 26S protease regulatory subunit 8 153 257 - -
Arst8g03962 534 Gene3D - 258 447 IPR027417 -
Arst8g03962 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 263 523 IPR027417 -
Arst8g03962 534 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03962 Arst-Chr8 49782561 49789306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03962 248 502 Calmodulin-binding Proteins AT3G56690 40.784 5.66e-52 189