Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03957 ATGGAAAACATTTGTTCAGAGGTTGAGATGGATTTGCCACCAGGATTCAGGTTTCACCCAACTGATGAAGAGCTTATAAGTCATTACCTTTACAACAAGGTCATTGACACTAACTTTTCAGCCAGAGCCATTGCTGAGGTGGACTTGAATAGGTCTGAGCCTTGGGATTTGCCATGGAAGGCGAAAATGGGTGAAAAAGAGTGGTACTTTTTCTGTGTAAGGGACAGAAAATACCCAACAGGATTGAGGACAAACAGAGCAACAGAAGCAGGGTATTGGAAGGCCACTGGAAAAGACAAGGAGATATACAGAGGCAAATCACTTGTTGGCATGAAGAAGACCCTTGTCTTCTACAAAGGTAGGGCTCCCAAAGGTGAGAAATCTGATTGGGTCATGCATGAGTTCAGGCTTCATGGTAAATTCAATCCCCACAACCTCCCCAAATCTGCAAAGAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGTCTTCAGCCGCCAAGAAAATCCATCTTACCGGGATAATGAGGTTGGACTCTTCTGTTTTCTTGCCACCATTGGCAGATTCCTCATCATCACCTTCCAACACTGCTACTACAGCACCTTACGTGCCCTGCTTCTCCAATCCAATCATTCACAACCAAGTTGGGATCTTTGATCCATTTAGCAACACCCCTTTTGGTGCTGATTCATTCTACTCTTCTCAAGGGATGCCAATGCAACATGCTCAGCCACCAAGTTCCACATATTCCGCTTCCGGCTACACCACTCATGACCATTCAATTCTCAGAGCCTTGCTTCAAAACAATTCTTCAAACCTCAGGAGTGGTTTCAAGCCTGCAGAGAGGGAAATGTCCCATCATCAAACTTCTCTTGTTGATGCCAATAACAACAACAATGGAATCACTTCTGTTGTTGCCCCACAGGACCTTTCTAGCCTCTGGAATTACCAGGTTCAGATCAAGTAG 966 0.4503 MENICSEVEMDLPPGFRFHPTDEELISHYLYNKVIDTNFSARAIAEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYKGRAPKGEKSDWVMHEFRLHGKFNPHNLPKSAKNEWVICRVFQKSSAAKKIHLTGIMRLDSSVFLPPLADSSSSPSNTATTAPYVPCFSNPIIHNQVGIFDPFSNTPFGADSFYSSQGMPMQHAQPPSSTYSASGYTTHDHSILRALLQNNSSNLRSGFKPAEREMSHHQTSLVDANNNNNGITSVVAPQDLSSLWNYQVQIK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03957 321 Gene3D NAC domain 21 167 IPR036093 GO:0003677|GO:0006355
Arst8g03957 321 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 264 - -
Arst8g03957 321 MobiDBLite consensus disorder prediction 272 297 - -
Arst8g03957 321 ProSiteProfiles NAC domain profile. 12 162 IPR003441 GO:0003677|GO:0006355
Arst8g03957 321 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Arst8g03957 321 FunFam NAC domain-containing protein 100-like 21 166 - -
Arst8g03957 321 SUPERFAMILY NAC domain 8 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03957 Arst-Chr8 49704668 49706183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03957 10 316 NAC Transcription Factor Family AT5G07680 54.321 1.74e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g03957 NAM 5.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03957 - - ahf:112708225 654.44