Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03956 ATGGGAAGGTCTCCTTGCTGCAGCCATGAGCATGTGAGGAAGGGTGCTTGGTCTCTTGAAGAAGATGAGAAGCTGAAAGCATACATTTACACTTATGGCCCTGGAAGCTGGCGCACCTTGCCCGACAAAGCTGGCCTTGAAAGATGTGGAAAGAGTTGCAGACTGAGGTGGTTTAACTACCTCAGACCTGGCATTAAGAGAGGCCGATTGAGCAGAGATGAGGAGCAGACCATCCTAAGACTCCATGCACTTCTTGGCAACAGGTGGTCCGCTATTGCCAAGCACTTGCCTAATCGAACTGACAACGAGATCAAGAACTACTGGAACTCTTCTCTCAACAAGAACAACCACTTATTACACACTCCTCCGCATCACCAGCAGCAGCAGCTTCATGTGCCATGCTTACTCAACAAAATGGCCAATTCCTTCTCTGGCAACCAAGCTGCAAAAGCACTCTTCTCCAAGCTAATGAATGGTGACGAAAAGGGTGAGGCTATTCAAGCCTCTTCTGTTCCAGCAGATCATCACAGTTGGCACTGCGCTGAGTCCTGTAATTCTACATTGAGCTTTCTAGATGACACCATTGCAGAAGCTCCTGAATTTATTCAAATGTTAAGGTATGAGGATGAGAGAATAAGCCTGTACATGCAGGATTTGTAA 660 0.4712 MGRSPCCSHEHVRKGAWSLEEDEKLKAYIYTYGPGSWRTLPDKAGLERCGKSCRLRWFNYLRPGIKRGRLSRDEEQTILRLHALLGNRWSAIAKHLPNRTDNEIKNYWNSSLNKNNHLLHTPPHHQQQQLHVPCLLNKMANSFSGNQAAKALFSKLMNGDEKGEAIQASSVPADHHSWHCAESCNSTLSFLDDTIAEAPEFIQMLRYEDERISLYMQDL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03956 219 Gene3D - 70 132 - -
Arst8g03956 219 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst8g03956 219 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 167 - -
Arst8g03956 219 CDD SANT 16 61 IPR001005 -
Arst8g03956 219 Gene3D - 14 66 - -
Arst8g03956 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst8g03956 219 FunFam Transcription factor RAX3 7 67 - -
Arst8g03956 219 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Arst8g03956 219 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst8g03956 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst8g03956 219 SMART sant 66 114 IPR001005 -
Arst8g03956 219 SMART sant 13 63 IPR001005 -
Arst8g03956 219 CDD SANT 71 112 IPR001005 -
Arst8g03956 219 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Arst8g03956 219 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03956 Arst-Chr8 49680421 49681522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03956 1 114 MYB Transcription Factor Family AT3G01140 71.930 6.25e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g03956 Myb_DNA-binding 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03956 K09422 - adu:107463556 417.927