Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03942 ATGGCGCTGTTCAAAAAGTTCTTCTACCGGAAGCCGCCGGATCGACTCCTTGAGATCTCCGAGAGGGTCTTTGAGAACGGGAAACGCGGAGCCAGAAGATATCTCCAGTATGTTTCCAGAAGACAATTGGGTTCTGAGTGGCCTCCACAAGAAACACCCTTGCTTTTGGACTATTTGATCCTCAGAAACCTTCCATTGTTTGATGGTGGAGAAGGTTGCAGGCCTATTGTTCGTGTCTATGGTCCAGACCCTACAAGACCTGACAATAGTAGCTCTAAAATTCTTTTCCGAACTCCAGGTTCCCTCGTTCAACACTACCCGCAGGCAGAATGTACGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATATTGTTCTTGAATGCATACATTTGAGTGAAGATTTAGTTGGGGAGGAAATGATGTTTAGAATAATGTTTCATACTGCATTTGTTCGCTCAAACACATTGATCTTGAGTCGTGACGATATTGATGTTGTGTGGGATTCAAAGGAGCAGTTCCCCAAGGACTTTAAAGCAGAGGTGCTTTTCTTGGACGCTTATGCTCTTGTACATAATCTATCCCCAATCAACGTAAGCCGAGATGTAAATGACAGTGAGAGTGATTCACCGGATGAGTTTTATGAAGTGGAAGAGATCTTTACGAATGCAATTGATGCACTTGAAGGTAGAGGAGAATTTGGCTCTCCTATGGTCCGTGATGATAGAAGTCATATAGACATTTGGAAAGATTCTTCAGATCCTCAAGCTTCTACTTCAGATGATGGGAGTCACCAACATATGGTCCGTGATGATAGAAGTCATATAGATATTGATCCTCAAGCCTTTACTTCAGATGATGGGAGTCACCAACATATGGTCCATGATGATAGAAGTCATATAGACATTTGGAAAGATTCTTCAGATCCTCAAGCCTTTACTTCAGATGATGGGAGTCACCAACAGGAGGTTGAAAGGGTACAATCCGATATTAATACAGTTAAAGACATTGCTGTTGCCTCTACTTCAGATGATGGGAGTCACCAACAGGAGGTTGAAAGGATAGAATCCAGTATTAATACAGTTAAAGATATTGATGTTGATGATGTCAAATACAAGTTTCAAGAAATAGCAGATTTGGATCCTCATGAGGTTAAAGATATTATTGTGGATGAGGTCGAGATTAAGTCGAATTCAATTGCAGACAAGATGGATTTAGAAGATGAGATAACAATTATAAACAAGAATTTTGATGAAAGGGAAGAAAAGCATGATCTTTCTATGTCACATTCTGATCATAAACTACATCCATCTACTGAAAAGAAGCATCATTCTCCCAAGTTAAAGATTAAACATCATGAACAACATAGTCACGAACAACATGGTGCTGAGACAAAACATCGCCACGAACAACATGGTGCCGAGGCAAAGCATAAACACGAACATAGTGTTGAGGCAAAGCATCAGCACGAACAACAGGGTGTTGAGGGAAGACGACATCATCAGGAACATAATGAACATCATGGTCACGAGGGAAAGCATGCAAAGGCAAGTGTAGCAGCTAAGTGGATTCCAAGTAACAAGGGTTCTTACCAGGATTCAATGCATGTATATTATCCAGCGTCAAGCCCCCATTACGTACCAATGAGTCCTCGAGGAAGGTCTCATAGTATTTCCCATCTTTCTGAGTTGAAAAGTCCTAAAGGGAGGAGCACTTCAAAATCTTTAGAACATATAGAACTTGATACTACCTCTCCATCATCATCCTCACCTTCACTTAAAGACCCACCTCTTGAGTCAACCACTCAAGAACCACACCTTAATTCAAATCCAATACTTCTGCCAGTACCTCCTCCACCCCCACCCCCACCCCCATCTATTGGGGAATTATCAAATGTAGTCTCCCTTTCTAATTCACCACCACCCCCTCCACCTCCACCTCCACCACTACCACCACCTTTTTCAAAATATGGAGTTCCAACAATTCCTCCACCTTCCCCTCTCTATATTCCCTTTACACAAGAAGATCCTAGACATCTTCTCTTGCCAACCTCCACTACATCATTTCAAGTTCCACCACCACCACCTTTACCACCATCATCCTTGACTTTACCATCCTTCACTAATGTAGATAGTAATCCACCACCACCCTCTCTTTTACCTGAATGTCTACCAACACAACCTCCATCTCCCTTGATTACATGTCCACCACCGCCACCGCCACCGCCACCACCACCGCCACGGCCTCTACCCCCACCCATTTCAAGTAAGGCTTCACCGCCACCACTACATTCTTCTCCATTAAATGAATTACTTGAAACACCACCACCACTATTTCCTTCATCAAGTGGAGCACCACCTATACCACAACCTCCTCCACCAACACCAGCACTTCCTTCATCAAGTGGAGAACCACCTGCTCCTCCATCAAATGCACCACTATCAACACCACCATCACTACTTGCTTCATCAAGTGGTGCACCACCTATACTACCACCAGCTCTTCCTCTATCACACGAAGCAGCAGCACCACCACCATCACTTCCTTCGTTAAGTGTAGCACTACACATGCCACTACCTCGCCCTCCTCCACCAATTTATAGAAATCAACCTCCTCCACCTCCTCCAATGAATGAATCACCCTCTCCTCCACCCACTCCTCCGCCTACTCCTCCGCAACCTCCAATGCATGCTATATCCCCTCTGACAATGCATGCAGCACTATCTCCTCCCCCACCTTCTCCGCCACCTAGTGCTCCTCCCTCACCTCCAAAGCCTGCAGCACTACCTCCTCCTCCACCTTCCACGCATGCAGCACCATCACCTTCGTCAGCTCCGAATCATACAACACCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCTCCCCCACCCCTAATGCATTCGGCACCACCACCTCTGCCACCTCCAACGGTGCATGCCGCGCCACCTCGGGTAAATGCAGCACCACCTCCTCCGCCACCTCCTCCACTTCCAATGTCAGGAGCGCCACCACCTCCACCACTTCCAGAAGGCCGTGGCCCACCTCCGCCACCTCCAATGCCCAGAGCACCACCGCCACCTCCAATGCCCGGAGCGCCACCACCTCCACCACCTCCATTTCCCGGAGCACCACCGCCACCTCAGATGCCCGGGGCGCCACCTCCTCCACCTCGAATGCCCGGAGCGCCTCCACCTCCTCCAATGCCTGGAGCACCTCAGCCACCTCCACCTCCAGATGGAGGTCGAGGACCAGGCCCTCCTCCGCCTCCTCCTCCTGGAAGTCGAGGACCAGGCCCACCTCCGCCTCCTGCTCCTGGACGTGGTGGCCCAGGCCCACCTCCGCCTCCTGGTAGTCTTCCAGGTGGTGGACCTCCACCGCCTCCCATGGGAAGAGGTGGTGGAGCTGCTAGAGGGCGTGGGCTCACACGTACTACAGCGATGCCTCGACGATCCCCTTTTAAGCCTTTGCATTGGAGTAAGGTTAGCAGGGCAATGCAAGGGAGCTTATGGGAAGAATTGCAAAGAAGTGCGGAACTTCAAACTGCACAAGAGTTTGACGTTTCAGAGCTGGAGAAGCTTTTTTCTGCAAGTGCTCCAAAAGCTGCTGATAAATCTGCCAAATCCAAAGCTGCTGCACCCAAAACTGATAAAGTCCAGTTGATCGATTTACGAAGGGCCTATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGACATGATGGCAGCAGTGCTAGCCATGGATGAGACGGTGTTAGATGGTGATCAGGTGGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAAACTTTGAAGGGATACACTGGTGACCCGGAGGCTTTAGGAAAATGTGAACAGTATTTTATGGAGCTGATGAAAGTGCCAAGAGTGGAGGCAAAATTAAGAGTGTTCTCTTTCAAGATTCAGTTTGGGACTCAGGCTGAAGACTTCAAGAGGAGTTTAAACACTGTGAACTCTGCCTGTGATGAGGTCCGAAATTCAGTTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAACACATTGAATGAAGGCACTGCAAGGGGAGCTGCAGTTGGGTTCAAGTTGGATAGTCTCTTAAAGCTTACTGACACTCGAGCTACTACGGGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGAAAAGTCTCCATCACTCCTTGATTTTCACCTTGACCTAGTTAACCTGGAAGCAGCCACTAAGATACAATTGAAGATGTTAGCAGAAGAAATGCAGGCACTCATCAAGGGATTAGAAAAGCTTAAACAGGAGCTTGCTGCATCTGAAACTGATGGCCCCGTGTCTGATGTTTTCCGTAAGACACTTAAAGAATTCCTTTCTATAGCGGAGTCGGAGGTGGAATCTGTAACAAACCTATATTCTTCAGCGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGCTGTCCATTTGAGCAAGTTACTGCTACTCTCTTGAATTTTACAAGACTGTTCCGAAAATCACATGATGAAAATGTCAAACAAGCGGAGGCAGATAAGAAGAAAGCGGAGAAAGAGGCTGAAATGGAGAGGGAGAAGGCTAAAGCCGGGACGCCAAGAAAGGGAGACGGCCAGACACCGAGGAAGTTTGATAGAGACATGGATGGCCAGACGCCAAGGAAGTCTGACATGGATGGCCAGACACCGAGGAAGTTTGACATGGATGGCGAGACACCGAGGAAGTTCGATAGAGAGATAGATGCGGAGACACCAAGAAAGGGTGACAAAGAGATGGAAGAAAGCTGA 4845 0.4733 MALFKKFFYRKPPDRLLEISERVFENGKRGARRYLQYVSRRQLGSEWPPQETPLLLDYLILRNLPLFDGGEGCRPIVRVYGPDPTRPDNSSSKILFRTPGSLVQHYPQAECTLVKIDIHCRVQGDIVLECIHLSEDLVGEEMMFRIMFHTAFVRSNTLILSRDDIDVVWDSKEQFPKDFKAEVLFLDAYALVHNLSPINVSRDVNDSESDSPDEFYEVEEIFTNAIDALEGRGEFGSPMVRDDRSHIDIWKDSSDPQASTSDDGSHQHMVRDDRSHIDIDPQAFTSDDGSHQHMVHDDRSHIDIWKDSSDPQAFTSDDGSHQQEVERVQSDINTVKDIAVASTSDDGSHQQEVERIESSINTVKDIDVDDVKYKFQEIADLDPHEVKDIIVDEVEIKSNSIADKMDLEDEITIINKNFDEREEKHDLSMSHSDHKLHPSTEKKHHSPKLKIKHHEQHSHEQHGAETKHRHEQHGAEAKHKHEHSVEAKHQHEQQGVEGRRHHQEHNEHHGHEGKHAKASVAAKWIPSNKGSYQDSMHVYYPASSPHYVPMSPRGRSHSISHLSELKSPKGRSTSKSLEHIELDTTSPSSSSPSLKDPPLESTTQEPHLNSNPILLPVPPPPPPPPPSIGELSNVVSLSNSPPPPPPPPPPLPPPFSKYGVPTIPPPSPLYIPFTQEDPRHLLLPTSTTSFQVPPPPPLPPSSLTLPSFTNVDSNPPPPSLLPECLPTQPPSPLITCPPPPPPPPPPPPRPLPPPISSKASPPPLHSSPLNELLETPPPLFPSSSGAPPIPQPPPPTPALPSSSGEPPAPPSNAPLSTPPSLLASSSGAPPILPPALPLSHEAAAPPPSLPSLSVALHMPLPRPPPPIYRNQPPPPPPMNESPSPPPTPPPTPPQPPMHAISPLTMHAALSPPPPSPPPSAPPSPPKPAALPPPPPSTHAAPSPSSAPNHTTPPPMHSAPPPPPPPPPPLMHSAPPPLPPPTVHAAPPRVNAAPPPPPPPPLPMSGAPPPPPLPEGRGPPPPPPMPRAPPPPPMPGAPPPPPPPFPGAPPPPQMPGAPPPPPRMPGAPPPPPMPGAPQPPPPPDGGRGPGPPPPPPPGSRGPGPPPPPAPGRGGPGPPPPPGSLPGGGPPPPPMGRGGGAARGRGLTRTTAMPRRSPFKPLHWSKVSRAMQGSLWEELQRSAELQTAQEFDVSELEKLFSASAPKAADKSAKSKAAAPKTDKVQLIDLRRAYNTEIMLTKVKMPLPDMMAAVLAMDETVLDGDQVENLIKFCPTKEEMETLKGYTGDPEALGKCEQYFMELMKVPRVEAKLRVFSFKIQFGTQAEDFKRSLNTVNSACDEVRNSVKLKEIMKKILYLGNTLNEGTARGAAVGFKLDSLLKLTDTRATTGKMTLMHYLCKVLAEKSPSLLDFHLDLVNLEAATKIQLKMLAEEMQALIKGLEKLKQELAASETDGPVSDVFRKTLKEFLSIAESEVESVTNLYSSAGRNADALALYFGEDPARCPFEQVTATLLNFTRLFRKSHDENVKQAEADKKKAEKEAEMEREKAKAGTPRKGDGQTPRKFDRDMDGQTPRKSDMDGQTPRKFDMDGETPRKFDREIDAETPRKGDKEMEES 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03942 1614 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 185 IPR035892 -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 423 518 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 550 1163 - -
Arst8g03942 1614 Pfam Formin Homology 2 Domain 1153 1518 IPR015425 -
Arst8g03942 1614 SMART it6_source 641 1583 IPR015425 -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 612 629 - -
Arst8g03942 1614 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1160 1538 - -
Arst8g03942 1614 Coils Coil 1425 1452 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 907 1135 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 638 672 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 453 518 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 423 440 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 689 703 - -
Arst8g03942 1614 Gene3D - 54 185 - -
Arst8g03942 1614 Pfam C2 domain of PTEN tumour-suppressor protein 50 185 IPR014020 -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 579 610 - -
Arst8g03942 1614 PRINTS Proline rich extensin signature 638 659 - -
Arst8g03942 1614 PRINTS Proline rich extensin signature 683 700 - -
Arst8g03942 1614 PRINTS Proline rich extensin signature 725 750 - -
Arst8g03942 1614 PRINTS Proline rich extensin signature 661 677 - -
Arst8g03942 1614 PRINTS Proline rich extensin signature 586 598 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 250 274 - -
Arst8g03942 1614 Coils Coil 1519 1548 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 1523 1614 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 830 844 - -
Arst8g03942 1614 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1147 1544 IPR015425 -
Arst8g03942 1614 ProSiteProfiles C2 tensin-type domain profile. 51 188 IPR014020 -
Arst8g03942 1614 PANTHER FORMIN-J 1067 1546 - -
Arst8g03942 1614 PANTHER FORMIN-J 1067 1546 - -
Arst8g03942 1614 SMART PTEN_C2_2 49 1200 IPR014020 -
Arst8g03942 1614 Gene3D Formin, FH2 domain 1166 1555 IPR042201 -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 857 899 - -
Arst8g03942 1614 Coils Coil 404 424 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 780 816 - -
Arst8g03942 1614 MobiDBLite consensus disorder prediction 711 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03942 Arst-Chr8 49627275 49636011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03942 33 361 FH2 protein (formin) Gene Family AT5G07740 46.866 3.44e-73 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03942 - - adu:107463462 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03942 8 49627275 49636011 Arst8g03942 8 49627275 49636011 ECH