Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03938 ATGTCACAGAAGGAAGCAGATTCATGGGGCTTCCTGTTAGTCTGTTTCTTGGTCCTTTTCTTCCCAGGTAAATTGGTTGCTGGGGGTTCAATGGATACAGACAAGCAAATTATGCTGAAGCTGAAATCTTACATAGAGAATCAAACTGTAGGTGACACAGGAAGGTTTATGAACTGGAACAACTCAAATCATTGTGATTGGTCAGGAATCTCTTGCAGCCTCATCAATGGTTCAGATTCATGGAGGGTTGTGAGCATAGACCTCTCTTCAAGTTCCATATCTGGTGAGATGTTCAGCAACTTCTCTATGCTCACTGAGCTCACACACCTTGATCTCTCTGGGAATTCATTCATTGGTATGATTCCTGAGGACTTGAGGAAGTGCCAGAACCTTGTGTACCTCAACCTCTCCCACAATATTCTTGAGGGGGAGCTGAATTTGACAGGCTTGACGAGGTTGCAGATGCTGGACTTGTCTACAAACAGGATTCGTGGGGAAATTCGATCGAATTTCCCTGCCATTTGTGAGAGTTTGGTAACACTGAATGTCTCAGAGAATCACTTCACTGGTGGGATTGATGGATGCTTTGACAAATGCCTCAGGTTGCAGTACTTGGATTTGAGCACCAACAATCTTACTGGAAGCATATGGACTGGGTTCGCAAGGCTCAGACAGTTTTCGGTGTCAGAAAACTATCTCACTGGGATTGTTCCTTCTCGTGCTTTTCCTGAAAATTGCAGCCTTGAAAAATTGGATCTTTCAGAGAATGGTTTTGTTGGTGAGGCCCCTAAGGATATTGCTAACTGCAAAGAATTGGTGACTCTTGATCTTTCCAGCAACTATTTTAATGGGACGGTTCCTAAAGAATTCGGATCGATCTCAGGACTAGAATCATTGCTCTTGGGGAACAACACTTTTTCAAGAGATATTCCAGATTCCCTTTTGAACTTGTCCAAGTTGTTCATCTTGGATGTGAGCAACAACGGATTTGGTGGTGATGTACAAGTGATTTTTGGGGAACTCAAGCAAGTTAAGTTTCTTCTCCTTCAATCAAATTCCTACACTGGAGGACTGCTCACATCAGGAATTTTCTCATTGACAAATCTTTGCCGATTAGATCTAAGCTTCAACAACTTTTCAGGTCCATTACCTCCTGAAATCTCTCAATTGTCAGGTCTCACTTTCTTAACCTTAACCTACAACAAGTTCAGTGGACCAATTCCAGCTGAACTTGGAAATTTGACCAACATTCAAGCACTTGATCTTGCCTTCAACAATTTCAATGGCTCAATCCCTCCAACCCTTGGAAAATTGAGTTCATTGCTATGGCTAATGCTTTCGGATAATTCGTTAACCGGTGAAATCCCACCAGAGTTGGGAAATTGCTCTAGCTTGTTGTGGTTGAATCTTGCAAACAACAAGCTCTCTGGAAGCTTGCCCTCAGAATTGGCCAGAATCGGAAGAAATGCAATGGCCACATTTGAATTGAACAGAAGAAATACTATTGGCAAAATCATTTCTGGAAATAGTGGATGCTCAGCAATGAGGAGATGGTTACCTGCTGATTACCCTCCATACACGTTTGTGTATACTGTTCTCACAAGGAAGAATTGTAGAAGCCTTTGGTACAAACTTCTCAAAGGCTATGGTGTTTTCTCCACATGGACATATGATTCTTCCTCTAAATCATCACAGATAGGTGGTTATATTCAATTAAGTGGGAATCAGCTCAGTGGTGAAGTACCTGCAGAAATTGGTAACATGGTGAACTTCAGCATGCTGCAATTGGGGGATAACAAGTTCTCTGGGAAGTTCCCATCAGTCATTTCAAACATGGCACTTATAGTCTTGAACATCTCCAGAAACAATTTCTCAGGCGAAATTCCAGGCGAAATCAGCAACATGAAGTCTCTTCAGGATCTTGATTTGTCTTGGAACAATTTCTCAGGGCCAATTCCTTCAAGTTTGTTCAACTTGGTTGAGCTTAGCACATTCAACATCTCATACAACCCCTTCATATCTGGTCAAGTGCCACAGAATGGATTTGTGATTTTTGACAAAAGTTCATATTTGGGTGACCCCCTCTTGAGCCTCCCTAGTTACATTAACAACACCAATTCTTCACACAAACATAAACACTTGACCAAGTCCACAAAATTTTCTCCATTTTTCATGTGTCTTTCTCTATCACTGGCCACGTTGGTCTTTGGACTCATCTGCCTAATAGTTTATTTCTTGCTGAAAACTCCGAAGGTGGAACAAGGATACCTTAAAAAGGTGGATAATGATTCCACAAGTTCAGGTTCATCACCATGGAATTCGGATACTGTCAAGATATTCCACTTGAACAAGACAGTTTTCACACATGCTGATATCTTGTTGGCAACAGGGAACTTCAAAGAGGATAGAGTCATAGGAAAAGGTGGATTTGGGACAGTGTACAAAGGAGTGTTTCCAGATGGTAGAGTAGTGGCAGTGAAGAAGCTTCAAAGGGAAGGTATTGAGGGCGAGAAAGAGTTCAGAGCCGAAATGGAGGTTCTGAGTGGCCATGGTTTTGGTTGGCCTCATCCAAACCTTGTTACACTCTATGGCTGGTGCCTATATGGTTCCCAGAAGATCCTTGTTTATGAGTACATAGGAGGAGGAAGCTTGGAGGATCTAGTCACTGACAAAGTGAGATTAACATCAAAGCGGCGCTTAGAAGTGGCAATTGATGTGGCAAGAGCATTGGTCTACTTGCACCATGAATGCTACCCTTCAATTGTTCATAGAGATGTTAAGGCTAGCAATGTGTTACTAGACAATGATGGTAATGCCAAAGTCACAGACTTTGGACTTGCAAGATTTGTTGATGCTGAGGATTCTCATGTTAGCACAATGGTTGCTGGAACAGTAGGGTACGTTGCACCGGAATATGGACAAACAATGCAAGCAACAACAAAGGGTGATGTGTATAGTTATGGGGTTTTGACTATGGAGCTTGCAACTGGGAGAAGAGCAGTGGATGGTGGTGAAGAGTGCTTGGTTGAATGGGCTAGGAGAGTTCTGGGGTTGAGCCATTCTGAGCCAGTTTTGGTCATGGAGGGTGAAGAGGAGATGCTTGAGCTGTTACAAGTTGGGGTTAAGTGCACAAATGAGTCACCACAAGCTAGGCCTAACATGAAGGAGGTCCTAGCCATGTTGGTCAAGATATACAACAATAACCCTAGTGGAGAATCAGGTTATGGCCACCTTGTTTAG 3240 0.4269 MSQKEADSWGFLLVCFLVLFFPGKLVAGGSMDTDKQIMLKLKSYIENQTVGDTGRFMNWNNSNHCDWSGISCSLINGSDSWRVVSIDLSSSSISGEMFSNFSMLTELTHLDLSGNSFIGMIPEDLRKCQNLVYLNLSHNILEGELNLTGLTRLQMLDLSTNRIRGEIRSNFPAICESLVTLNVSENHFTGGIDGCFDKCLRLQYLDLSTNNLTGSIWTGFARLRQFSVSENYLTGIVPSRAFPENCSLEKLDLSENGFVGEAPKDIANCKELVTLDLSSNYFNGTVPKEFGSISGLESLLLGNNTFSRDIPDSLLNLSKLFILDVSNNGFGGDVQVIFGELKQVKFLLLQSNSYTGGLLTSGIFSLTNLCRLDLSFNNFSGPLPPEISQLSGLTFLTLTYNKFSGPIPAELGNLTNIQALDLAFNNFNGSIPPTLGKLSSLLWLMLSDNSLTGEIPPELGNCSSLLWLNLANNKLSGSLPSELARIGRNAMATFELNRRNTIGKIISGNSGCSAMRRWLPADYPPYTFVYTVLTRKNCRSLWYKLLKGYGVFSTWTYDSSSKSSQIGGYIQLSGNQLSGEVPAEIGNMVNFSMLQLGDNKFSGKFPSVISNMALIVLNISRNNFSGEIPGEISNMKSLQDLDLSWNNFSGPIPSSLFNLVELSTFNISYNPFISGQVPQNGFVIFDKSSYLGDPLLSLPSYINNTNSSHKHKHLTKSTKFSPFFMCLSLSLATLVFGLICLIVYFLLKTPKVEQGYLKKVDNDSTSSGSSPWNSDTVKIFHLNKTVFTHADILLATGNFKEDRVIGKGGFGTVYKGVFPDGRVVAVKKLQREGIEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEDLVTDKVRLTSKRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDNDGNAKVTDFGLARFVDAEDSHVSTMVAGTVGYVAPEYGQTMQATTKGDVYSYGVLTMELATGRRAVDGGEECLVEWARRVLGLSHSEPVLVMEGEEEMLELLQVGVKCTNESPQARPNMKEVLAMLVKIYNNNPSGESGYGHLV 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03938 1079 Pfam Leucine Rich Repeat 637 659 IPR001611 GO:0005515
Arst8g03938 1079 FunFam Putative LRR receptor-like serine/threonine-protein kinase 341 503 - -
Arst8g03938 1079 ProSiteProfiles Leucine-rich repeat profile. 130 151 IPR001611 GO:0005515
Arst8g03938 1079 Gene3D Ribonuclease Inhibitor 32 147 IPR032675 -
Arst8g03938 1079 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Arst8g03938 1079 SUPERFAMILY L domain-like 220 674 - -
Arst8g03938 1079 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 879 1069 - -
Arst8g03938 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Arst8g03938 1079 SMART LRR_typ_2 104 128 IPR003591 -
Arst8g03938 1079 SMART LRR_typ_2 150 173 IPR003591 -
Arst8g03938 1079 SMART LRR_typ_2 293 317 IPR003591 -
Arst8g03938 1079 SMART LRR_typ_2 635 659 IPR003591 -
Arst8g03938 1079 SMART LRR_typ_2 366 390 IPR003591 -
Arst8g03938 1079 SMART LRR_typ_2 438 462 IPR003591 -
Arst8g03938 1079 SMART serkin_6 799 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03938 1079 Pfam Leucine rich repeat 106 163 IPR001611 GO:0005515
Arst8g03938 1079 Pfam Protein kinase domain 799 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03938 1079 FunFam Calmodulin-binding receptor kinase CaMRLK 568 679 - -
Arst8g03938 1079 CDD STKc_IRAK 805 1064 - -
Arst8g03938 1079 SUPERFAMILY Protein kinase-like (PK-like) 772 1062 IPR011009 -
Arst8g03938 1079 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 334 - -
Arst8g03938 1079 Gene3D Ribonuclease Inhibitor 148 243 IPR032675 -
Arst8g03938 1079 Gene3D Transferase(Phosphotransferase) domain 1 880 1073 - -
Arst8g03938 1079 ProSiteProfiles Protein kinase domain profile. 799 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03938 1079 ProSitePatterns Protein kinases ATP-binding region signature. 805 828 IPR017441 GO:0005524
Arst8g03938 1079 Gene3D Ribonuclease Inhibitor 336 518 IPR032675 -
Arst8g03938 1079 Gene3D Ribonuclease Inhibitor 536 714 IPR032675 -
Arst8g03938 1079 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 246 1063 - -
Arst8g03938 1079 Gene3D Phosphorylase Kinase; domain 1 762 878 - -
Arst8g03938 1079 FunFam Leucine-rich repeat receptor protein kinase MSP1 762 878 - -
Arst8g03938 1079 SUPERFAMILY L domain-like 56 303 - -
Arst8g03938 1079 Gene3D Ribonuclease Inhibitor 244 335 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03938 Arst-Chr8 49577746 49581741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03938 13 1073 Receptor kinase-like Gene Family AT1G55610 32.525 8.61e-156 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Arst8g03938 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03938 - - gmx:100813425 1474.53